RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 RBSNQ9H1K0 784 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 GRPEL1Q9HAV7 217 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ATP13A1Q9HD20 1204 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 PARVAQ9NVD7 372 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 TMEM248Q9NWD8 314 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLC25A13Q9UJS0 675 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 HS3ST2Q9Y278 367 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 LUC7L2Q9Y383 392 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 NYNRINQ9P2P1 1898 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 ILVBLA1L0T0 632 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 PRR5-ARHGAP8B1AHC4 643 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 C10orf142B7Z368 130 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 LRCH4O75427 683 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 FSBPO95073 299 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 KCNA4P22459 653 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 OXTRP30559 389 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 GALCP54803 685 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 ARHGAP8P85298 464 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 SULT2A1Q06520 285 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 CNTN1Q12860 1018 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 PUM1Q14671 1186 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 UAP1L1Q3KQV9 507 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 C6orf118Q5T5N4 469 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 C22orf39Q6P5X5 142 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 DPY19L3Q6ZPD9 716 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 DNASE2BQ8WZ79 361 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 BIRC7Q96CA5 298 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 HMCESQ96FZ2 354 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 CELF6Q96J87 481 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 GTPBP2Q9BX10 602 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 EVLQ9UI08 416 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 PPM1HQ9ULR3 514 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 CACNA1EQ15878 2313 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 KNL1Q8NG31 2342 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 ASPMQ8IZT6 3477 aa11.66□□□□□ -0.54
RAPGEF1-207ENST00000481260 PI4KAP42356 2102 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 KCNK3O14649 394 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 CYP1A2P05177 515 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 EPHB2P29323 1055 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 L1CAMP32004 1257 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 SERPINH1P50454 418 aaKnown RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 TERF1P54274 439 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ADPRHP54922 357 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 TAS2R38P59533 333 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 MTA1Q13330 715 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ELAVL3Q14576 367 aaKnown RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 DUOXA1Q1HG43 343 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 SMTNL2Q2TAL5 461 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ASTE1Q2TB18 679 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 EFHC2Q5JST6 749 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 SPDYCQ5MJ68 293 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 CCDC122Q5T0U0 273 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ATXN7L2Q5T6C5 722 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 AGBL4Q5VU57 503 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 IL31Q6EBC2 164 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLC23A3Q6PIS1 610 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 NPWQ8N729 165 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 RTL3Q8N8U3 475 aaKnown RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 CADM4Q8NFZ8 388 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 PIP4K2CQ8TBX8 421 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 GRIN3AQ8TCU5 1115 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLC6A18Q96N87 628 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 DNAJC7Q99615 494 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 TM6SF2Q9BZW4 377 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 BTBD1Q9H0C5 482 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 DHX35Q9H5Z1 703 aaKnown RBP11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 AP4E1Q9UPM8 1137 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 CA5BQ9Y2D0 317 aa11.65□□□□□ -0.54
RAPGEF1-207ENST00000481260 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 CEP295Q9C0D2 2601 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 A0A1B0GVT2 93 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 ESPNB1AK53 854 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 MCF2LO15068 1137 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 INSIG1O15503 277 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 GJB3O75712 270 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 WNT1P04628 370 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 SERPINF2P08697 491 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 GOT1P17174 413 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 HNRNPH3P31942 346 aaKnown RBP11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 CHRNA3P32297 505 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 CSNK1EP49674 416 aaKnown RBP11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 DNA2P51530 1060 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 LIMK1P53667 647 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 OXCT1P55809 520 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 KRT83P78385 493 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 ZBTB16Q05516 673 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 GRIK2Q13002 908 aa11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 TTC31Q49AM3 519 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF1-207ENST00000481260 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms