RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 J3KR12 359 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 RPP40O75818 363 aaKnown RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 KDELR1P24390 212 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 NBL1P41271 181 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 DNA2P51530 1060 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 YBEYP58557 167 aaPredicted RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 RPS14P62263 151 aaKnown RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 SERINC3Q13530 473 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 PDK2Q15119 407 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 USP39Q53GS9 565 aaKnown RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 ANKRD20A8PQ5CZ79 823 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 AFMIDQ63HM1 303 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 C11orf63Q6NUN7 778 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 TMCO3Q6UWJ1 677 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 ARHGAP36Q6ZRI8 547 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 PRR23BQ6ZRT6 265 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 CEP68Q76N32 757 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 GAB3Q8WWW8 586 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 ANP32BQ92688 251 aaKnown RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 PRCCQ92733 491 aaPredicted RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 RNF25Q96BH1 459 aaPredicted RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 ZNF830Q96NB3 372 aaPredicted RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 FAM129BQ96TA1 746 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 CYP8B1Q9UNU6 501 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 ARIH1Q9Y4X5 557 aaPredicted RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 FRYLO94915 3013 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 BCKDHBP21953 392 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 MARCKSL1P49006 195 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 SERPINH1P50454 418 aaKnown RBP20.77■□□□□ 0.92
CTSA-206ENST00000480961 VASPP50552 380 aaPredicted RBP20.77■□□□□ 0.92
CTSA-206ENST00000480961 SIM2Q14190 667 aaPredicted RBP20.77■□□□□ 0.92
CTSA-206ENST00000480961 LLGL1Q15334 1064 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 MAP7D1Q3KQU3 841 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 LRRC38Q5VT99 294 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 MMAAQ8IVH4 418 aaKnown RBP20.77■□□□□ 0.92
CTSA-206ENST00000480961 MAP7D3Q8IWC1 876 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 DONSONQ9NYP3 566 aa20.77■□□□□ 0.92
CTSA-206ENST00000480961 ZFHX2Q9C0A1 2572 aaPredicted RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 GRID2IPA4D2P6 1211 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 ARHGAP42A6NI28 874 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 C3orf70A6NLC5 250 aaPredicted RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 ZNF821O75541 412 aaPredicted RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 P2RY2P41231 377 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 SLC20A2Q08357 652 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 C22orf39Q6P5X5 142 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 KBTBD6Q86V97 674 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 PQLC3Q8N755 202 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 KRT35Q92764 455 aa20.76■□□□□ 0.91
CTSA-206ENST00000480961 RSPH9Q9H1X1 276 aaPredicted RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 RCOR3Q9P2K3 495 aaPredicted RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 MBD1Q9UIS9 605 aaPredicted RBP20.76■□□□□ 0.91
CTSA-206ENST00000480961 MUC22E2RYF6 1773 aaPredicted RBP20.75■□□□□ 0.91
CTSA-206ENST00000480961 PALMO75781 387 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 MAP3K6O95382 1288 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 ACADMP11310 421 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 CNR2P34972 360 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 PSMD8P48556 350 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 POM121L1PQ3SYA9 428 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 ODF2Q5BJF6 829 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 ZNF776Q68DI1 518 aaPredicted RBP20.75■□□□□ 0.91
CTSA-206ENST00000480961 FAM124AQ86V42 546 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 TXLNBQ8N3L3 684 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 DEFB119Q8N690 84 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 CHST14Q8NCH0 376 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 OR2A12Q8NGT7 310 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 KIAA1524Q8TCG1 905 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 ZNF670Q9BS34 389 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 TM6SF2Q9BZW4 377 aa20.75■□□□□ 0.91
CTSA-206ENST00000480961 MID1O15344 667 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 MAP3K13O43283 966 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 PRAMEF11O60813 436 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 IL1BP01584 269 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 TPMTP51580 245 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 CLCN6P51797 869 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 METAP1P53582 386 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 NCBP2-AS2Q69YL0 99 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 MFSD7Q6UXD7 560 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 LZTR1Q8N653 840 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 LRRC57Q8N9N7 239 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 OR6K2Q8NGY2 324 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 GANCQ8TET4 914 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 LRRN4Q8WUT4 740 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 OR8D1Q8WZ84 308 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 FAF2Q96CS3 445 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 RNF157Q96PX1 679 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 ITM2CQ9NQX7 267 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 DDX56Q9NY93 547 aaKnown RBP20.74■□□□□ 0.91
CTSA-206ENST00000480961 IPO11Q9UI26 975 aaKnown RBP20.74■□□□□ 0.91
CTSA-206ENST00000480961 GUCA1BQ9UMX6 200 aa20.74■□□□□ 0.91
CTSA-206ENST00000480961 IGHV1OR15-9A0A0B4J2B8 117 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 RNF103O00237 685 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 MFSD11O43934 449 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 RNASEH1O60930 286 aaKnown RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 TMCC1O94876 653 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 DNTTP04053 509 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 ELAVL3Q14576 367 aaKnown RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 CYTH1Q15438 398 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 CST6Q15828 149 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms