RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 B3GNT4Q9C0J1 378 aa5.6□□□□□ -1.51
CALD1-219ENST00000480638 SIRT3Q9NTG7 399 aaPredicted RBP5.6□□□□□ -1.51
CALD1-219ENST00000480638 HDAC6Q9UBN7 1215 aa5.6□□□□□ -1.51
CALD1-219ENST00000480638 CD207Q9UJ71 328 aa5.6□□□□□ -1.51
CALD1-219ENST00000480638 SLC4A4Q9Y6R1 1079 aa5.6□□□□□ -1.51
CALD1-219ENST00000480638 MST1RQ04912 1400 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 TPD52L2O43399 206 aaKnown RBP5.59□□□□□ -1.51
CALD1-219ENST00000480638 UNGP13051 313 aaPredicted RBP5.59□□□□□ -1.51
CALD1-219ENST00000480638 MTNR1AP48039 350 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 GOLGA8FQ08AF8 430 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 IL13RA2Q14627 380 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 ANKRD1Q15327 319 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 SYTL3Q4VX76 610 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 DENND1BQ6P3S1 775 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 WDR5BQ86VZ2 330 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 PELI3Q8N2H9 469 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 MORC4Q8TE76 937 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 NCSTNQ92542 709 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 RNFT2Q96EX2 444 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 TEFMQ96QE5 360 aaKnown RBP5.59□□□□□ -1.51
CALD1-219ENST00000480638 WDR77Q9BQA1 342 aaPredicted RBP5.59□□□□□ -1.51
CALD1-219ENST00000480638 GDAQ9Y2T3 454 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 RAP2CQ9Y3L5 183 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 DGKBQ9Y6T7 804 aa5.59□□□□□ -1.51
CALD1-219ENST00000480638 VWA3AA6NCI4 1184 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 STRNO43815 780 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 DHX16O60231 1041 aaKnown RBP5.58□□□□□ -1.52
CALD1-219ENST00000480638 RASSF2P50749 326 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 CLCNKBP51801 687 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 SH2D4BQ5SQS7 431 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 C9orf47Q6ZRZ4 202 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 C9orf106Q8NAJ2 232 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 ENGASEQ8NFI3 743 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 GCC1Q96CN9 775 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
CALD1-219ENST00000480638 SCLT1Q96NL6 688 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 CAMK1GQ96NX5 476 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 DHDHQ9UQ10 334 aa5.58□□□□□ -1.52
CALD1-219ENST00000480638 OR6C68A6NDL8 312 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 TNFRSF13BO14836 293 aaPredicted RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 HBP1O60381 514 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 EIF3JO75822 258 aaKnown RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 CPA1P15085 419 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 CHRNB2P17787 502 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 SKIV2L2P42285 1042 aaKnown RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 PTPN9P43378 593 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 FOXG1P55316 489 aaPredicted RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 TMPRSS3P57727 454 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 SLC12A1Q13621 1099 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 WASHC2DQ5SRD0 308 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 TMEM268Q5VZI3 342 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 TBC1D9BQ66K14 1250 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 TMEM71Q6P5X7 295 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 ZNF549Q6P9A3 640 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 GJB7Q6PEY0 223 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 SLC16A12Q6ZSM3 486 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 TRIM74Q86UV6 250 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 TRIM73Q86UV7 250 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 CAMK1DQ8IU85 385 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 ANKRD18AQ8IVF6 992 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 HORMAD2Q8N7B1 307 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 USP38Q8NB14 1042 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 C7orf57Q8NEG2 295 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 ASB5Q8WWX0 329 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 PSMD1Q99460 953 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 WACQ9BTA9 647 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 RBM38Q9H0Z9 239 aaKnown RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 ISCUQ9H1K1 167 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 EBF3Q9H4W6 596 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 KLHL31Q9H511 634 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 STN1Q9H668 368 aaKnown RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 KRCC1Q9NPI7 259 aaPredicted RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 PLEKHB1Q9UF11 243 aaPredicted RBP5.57□□□□□ -1.52
CALD1-219ENST00000480638 CDH22Q9UJ99 828 aa5.57□□□□□ -1.52
CALD1-219ENST00000480638 SPTLC2O15270 562 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 KLK10O43240 276 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 CBX6O95503 412 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 HSD3B1P14060 373 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 HNF1BP35680 557 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 SELENOVP59797 346 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 MAP3K21Q5TCX8 1036 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 CTU1Q7Z7A3 348 aaKnown RBP5.56□□□□□ -1.52
CALD1-219ENST00000480638 SETD9Q8NE22 299 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 GABPB2Q8TAK5 448 aaPredicted RBP5.56□□□□□ -1.52
CALD1-219ENST00000480638 BICD2Q8TD16 824 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 NPLQ9BXD5 320 aaPredicted RBP5.56□□□□□ -1.52
CALD1-219ENST00000480638 CXorf56Q9H5V9 222 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 GRHL1Q9NZI5 618 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 LUZP4Q9P127 313 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.56□□□□□ -1.52
CALD1-219ENST00000480638 FBXO40Q9UH90 709 aa5.56□□□□□ -1.52
CALD1-219ENST00000480638 RPS10-NUDT3A0A1W2PQS6 291 aa5.55□□□□□ -1.52
CALD1-219ENST00000480638 TARSL2A2RTX5 802 aaKnown RBP5.55□□□□□ -1.52
CALD1-219ENST00000480638 EIF3FO00303 357 aaPredicted RBP5.55□□□□□ -1.52
CALD1-219ENST00000480638 PEX12O00623 359 aa5.55□□□□□ -1.52
CALD1-219ENST00000480638 INSIG1O15503 277 aa5.55□□□□□ -1.52
CALD1-219ENST00000480638 RNMTO43148 476 aaKnown RBP5.55□□□□□ -1.52
CALD1-219ENST00000480638 ANP32CO43423 234 aa5.55□□□□□ -1.52
CALD1-219ENST00000480638 WEE2P0C1S8 567 aa5.55□□□□□ -1.52
CALD1-219ENST00000480638 MYZAPP0CAP1 466 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms