RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 CCNG2Q16589 344 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 FSCBQ5H9T9 825 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 FAM182AQ5T1J6 154 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 C6orf118Q5T5N4 469 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.49
PDCD11-204ENST00000478543 AFMIDQ63HM1 303 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 CXorf57Q6NSI4 855 aaKnown RBP11.96□□□□□ -0.49
PDCD11-204ENST00000478543 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 DARS2Q6PI48 645 aaKnown RBP11.96□□□□□ -0.49
PDCD11-204ENST00000478543 ARHGAP36Q6ZRI8 547 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 UMODL1-AS1Q8N2C9 162 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 CPA6Q8N4T0 437 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 ATPAF2Q8N5M1 289 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 C12orf50Q8NA57 414 aaPredicted RBP11.96□□□□□ -0.49
PDCD11-204ENST00000478543 CCNYQ8ND76 341 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 SLC35B2Q8TB61 432 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 HMCESQ96FZ2 354 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 CCDC114Q96M63 670 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 OLFM3Q96PB7 478 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 KRT12Q99456 494 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 SPON2Q9BUD6 331 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 MUC3BQ9H195 1237 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 BRD9Q9H8M2 597 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 ECT2Q9H8V3 914 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 DONSONQ9NYP3 566 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 MARK1Q9P0L2 795 aa11.96□□□□□ -0.49
PDCD11-204ENST00000478543 CEP295Q9C0D2 2601 aa11.96□□□□□ -0.5
PDCD11-204ENST00000478543 DMXL2Q8TDJ6 3036 aa11.96□□□□□ -0.5
PDCD11-204ENST00000478543 A0A0D9SEW6 157 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 OTOL1A6NHN0 477 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 ARHGAP42A6NI28 874 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 PPP1R12AO14974 1030 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CHADO15335 359 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 SLU7O95391 586 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 MZF1P28698 734 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CHRNA3P32297 505 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CD70P32970 193 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 NDST2P52849 883 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 MRPS25P82663 173 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 GNA12Q03113 381 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 GALNT2Q10471 571 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 AP1B1Q10567 949 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 LMAN2Q12907 356 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 RUNX3Q13761 415 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 BYSLQ13895 437 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 PDK1Q15118 436 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CYP1B1Q16678 543 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 SLC44A4Q53GD3 710 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 MPP7Q5T2T1 576 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CCDC137Q6PK04 289 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 LEKR1Q6ZMV7 388 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 BZW1Q7L1Q6 419 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 SETD3Q86TU7 594 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CDKL3Q8IVW4 592 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 ZNF687Q8N1G0 1237 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 ARHGEF2Q92974 986 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 CLDN23Q96B33 292 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 QKIQ96PU8 341 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 LGMNQ99538 433 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 FRMD8P1Q9BZ68 369 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 RETREG1Q9H6L5 497 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 DNAJC17Q9NVM6 304 aaKnown RBP11.95□□□□□ -0.5
PDCD11-204ENST00000478543 GTSE1Q9NYZ3 720 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 SEPT10Q9P0V9 454 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 ZNF148Q9UQR1 794 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 TBC1D30Q9Y2I9 924 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 RAD54BQ9Y620 910 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 AKAP13Q12802 2813 aa11.95□□□□□ -0.5
PDCD11-204ENST00000478543 COL4A2P08572 1712 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 FREM2Q5SZK8 3169 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
PDCD11-204ENST00000478543 ILVBLA1L0T0 632 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 TRIM24O15164 1050 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 HOXC11O43248 304 aaPredicted RBP11.94□□□□□ -0.5
PDCD11-204ENST00000478543 VAV1P15498 845 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 MX2P20592 715 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 GLDCP23378 1020 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 RBL1P28749 1068 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 GARSP41250 739 aaKnown RBP11.94□□□□□ -0.5
PDCD11-204ENST00000478543 SLC6A11P48066 632 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 FNTAP49354 379 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 YBEYP58557 167 aaPredicted RBP11.94□□□□□ -0.5
PDCD11-204ENST00000478543 KDSRQ06136 332 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 MTAPQ13126 283 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 NR1H3Q13133 447 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 XRCC4Q13426 336 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 OASLQ15646 514 aaKnown RBP11.94□□□□□ -0.5
PDCD11-204ENST00000478543 PARP15Q460N3 678 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 SLC45A4Q5BKX6 768 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 TEX35Q5T0J7 233 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 RNF43Q68DV7 783 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 IL31Q6EBC2 164 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 C12orf40Q86WS4 652 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 FIBINQ8TAL6 211 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 NETO1Q8TDF5 533 aa11.94□□□□□ -0.5
PDCD11-204ENST00000478543 CSGALNACT1Q8TDX6 532 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms