RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095	NPW	Q8N729	165 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	KDM1B	Q8NB78	822 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	OR2T3	Q8NH03	318 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	FRS2	Q8WU20	508 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	GAB3	Q8WWW8	586 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	PRCC	Q92733	491 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	PTPRN2	Q92932	1015 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	NKD2	Q969F2	451 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	FAM122A	Q96E09	287 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SIPA1	Q96FS4	1042 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	CSPG4P5	Q96PW8	444 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	CALN1	Q9BXU9	219 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	ACE2	Q9BYF1	805 aa	Predicted RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	LACRT	Q9GZZ8	138 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	KLC2	Q9H0B6	622 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	MAGEH1	Q9H213	219 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	EPC1	Q9H2F5	836 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	TNKS2	Q9H2K2	1166 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	ETNK2	Q9NVF9	386 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SUN2	Q9UH99	717 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	LCMT1	Q9UIC8	334 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	CYP8B1	Q9UNU6	501 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	SMG5	Q9UPR3	1016 aa	Known RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	FCF1	Q9Y324	198 aa	Known RBP	10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	DUSP10	Q9Y6W6	482 aa		10.5	□□□□□ -0.73
HDAC6-222	ENST00000478095	DFFA	O00273	331 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	SPOP	O43791	374 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	ATP9B	O43861	1147 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	KRT7	P08729	469 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	CNR2	P34972	360 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	PLA2G5	P39877	138 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	P2RY2	P41231	377 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	PSMD8	P48556	350 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	SERPINH1	P50454	418 aa	Known RBP	10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	VAV2	P52735	878 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	NAP1L1	P55209	391 aa	Known RBP	10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	RPS14	P62263	151 aa	Known RBP	10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	TCEAL1	Q15170	157 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	PROX2	Q3B8N5	592 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	RETSAT	Q6NUM9	610 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	C22orf39	Q6P5X5	142 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	ASCL5	Q7RTU5	278 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	KBTBD6	Q86V97	674 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	TP53INP2	Q8IXH6	220 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	UMODL1-AS1	Q8N2C9	162 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	KCTD6	Q8NC69	237 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	SPACA7	Q96KW9	195 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	SLC39A8	Q9C0K1	460 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	RETREG1	Q9H6L5	497 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	TRIM10	Q9UDY6	481 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	RABGEF1	Q9UJ41	708 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	HPCAL4	Q9UM19	191 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	HS3ST2	Q9Y278	367 aa		10.49	□□□□□ -0.73
HDAC6-222	ENST00000478095	ATG2B	Q96BY7	2078 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MUC22	E2RYF6	1773 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095		A0A0A6YYK5	440 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MACROD2	A1Z1Q3	448 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	LRRD1	A4D1F6	860 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	PRR23A	A6NEV1	266 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	KDELR3	O43731	214 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	CD160	O95971	181 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	LMNA	P02545	664 aa	Known RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	KRT1	P04264	644 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ACADM	P11310	421 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	IL4R	P24394	825 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MLLT3	P42568	568 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	SLC1A1	P43005	524 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	HCAR3	P49019	387 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	PAPOLA	P51003	745 aa	Known RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	DNA2	P51530	1060 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARSE	P51690	589 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZNF135	P52742	658 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	METAP1	P53582	386 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	HADHB	P55084	474 aa	Known RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	YBEY	P58557	167 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	SERINC3	Q13530	473 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	DPYSL3	Q14195	570 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MAP7D1	Q3KQU3	841 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	POM121L1P	Q3SYA9	428 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	PARP15	Q460N3	678 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ZNF776	Q68DI1	518 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	TMCO3	Q6UWJ1	677 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARHGAP36	Q6ZRI8	547 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARMCX6	Q7L4S7	300 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	FAM124A	Q86V42	546 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MMAA	Q8IVH4	418 aa	Known RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	ARHGAP12	Q8IWW6	846 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	DEFB119	Q8N690	84 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	SUMF1	Q8NBK3	374 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	TPCN2	Q8NHX9	752 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	RAPGEF5	Q92565	580 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	TSC1	Q92574	1164 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	FAM129B	Q96TA1	746 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	TM6SF2	Q9BZW4	377 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	LRRC19	Q9H756	370 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MBD1	Q9UIS9	605 aa	Predicted RBP	10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	RAB23	Q9ULC3	237 aa		10.48	□□□□□ -0.73
HDAC6-222	ENST00000478095	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms