RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CNOT9Q92600 299 aaKnown RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 SLC22A18Q96BI1 424 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 FBXL20Q96IG2 436 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PGBD1Q96JS3 809 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 WDFY2Q96P53 400 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 SPAG5Q96R06 1193 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 KLC2Q9H0B6 622 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 EPHX3Q9H6B9 360 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 NRDE2Q9H7Z3 1164 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 KLC4Q9NSK0 619 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 GIMAP4Q9NUV9 329 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 C5AR2Q9P296 337 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 SLCO3A1Q9UIG8 710 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 SH2B3Q9UQQ2 575 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 PTRH2Q9Y3E5 179 aaKnown RBP4.43□□□□□ -1.7
VPS13D-207ENST00000476169 KNSTRNQ9Y448 316 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 TRPV2Q9Y5S1 764 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 SESN1Q9Y6P5 492 aa4.43□□□□□ -1.7
VPS13D-207ENST00000476169 K7ESM1 405 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 M0QZQ0 153 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 LDLRAD4O15165 306 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 IPO8O15397 1037 aaKnown RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SPRY2O43597 315 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 PMPCBO75439 489 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 B3GALNT1O75752 331 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 NXPH3O95157 252 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CSPG5O95196 566 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ONECUT2O95948 504 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CHRM2P08172 466 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ABCB1P08183 1280 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ITGAMP11215 1152 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF37AP17032 561 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 MMP8P22894 467 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CPT2P23786 658 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ADRA1DP25100 572 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 KIF5BP33176 963 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 MCM5P33992 734 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 MCM7P33993 719 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SLC15A1P46059 708 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 LIG4P49917 911 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SUMO2P61956 95 aaKnown RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ARHGAP8P85298 464 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 AIMP2Q13155 320 aaKnown RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SLMAPQ14BN4 828 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 PKN2Q16513 984 aaKnown RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 DPCR1Q3MIW9 517 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SH2D4BQ5SQS7 431 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 TMEM81Q6P7N7 255 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SARM1Q6SZW1 724 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 USP51Q70EK9 711 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CHST3Q7LGC8 479 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 PLPPR4Q7Z2D5 763 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CCDC186Q7Z3E2 898 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 LCA5Q86VQ0 697 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 PALM2Q8IXS6 379 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 LNX2Q8N448 690 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 IL17DQ8TAD2 202 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SH3RF3Q8TEJ3 882 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 DEPDC1BQ8WUY9 529 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 NPIPB3Q92617 1050 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 EXTL1Q92935 676 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 FAM149B1Q96BN6 582 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 RAB3IPQ96QF0 476 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 PRR25Q96S07 402 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ALG8Q9BVK2 526 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ACAT2Q9BWD1 397 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 DNAI2Q9GZS0 605 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ANKRD2Q9GZV1 360 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF703Q9H7S9 590 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 COPS7BQ9H9Q2 264 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 LTB4R2Q9NPC1 389 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 KCNK9Q9NPC2 374 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 RXFP3Q9NSD7 469 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 KCTD5Q9NXV2 234 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 MARCH4Q9P2E8 410 aaPredicted RBP4.42□□□□□ -1.7
VPS13D-207ENST00000476169 WDR35Q9P2L0 1181 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 PEMTQ9UBM1 199 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 DKK3Q9UBP4 350 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CD207Q9UJ71 328 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 MOSPD1Q9UJG1 213 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 SLC25A13Q9UJS0 675 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CCL27Q9Y4X3 112 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 POMT1Q9Y6A1 747 aa4.42□□□□□ -1.7
VPS13D-207ENST00000476169 CCDC187A0A096LP49 1063 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ARHGEF37A1IGU5 675 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 URADA6NGE7 173 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 GLOD5A6NK44 160 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 TTC36A6NLP5 189 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 KCNJ18B7U540 433 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 PI4K2BG5E9Z4 385 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 H0YAE9 185 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 AP4M1O00189 453 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CES2O00748 559 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 YY2O15391 372 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms