RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 NR1I3Q14994 352 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 N4BP2L1Q5TBK1 243 aaPredicted RBP20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3GQ6DHY5 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3CQ6IPX1 549 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 SCYL2Q6P3W7 929 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 NCEH1Q6PIU2 408 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 Q6ZVU0 165 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 PHLDB2Q86SQ0 1253 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 ZSCAN30Q86W11 494 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 DRC7Q8IY82 874 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TBC1D3Q8IZP1 549 aaPredicted RBP20.95■□□□□ 0.94
SNX13-206ENST00000474067 PIP4K2CQ8TBX8 421 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 PREBQ9HCU5 417 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 TM9SF3Q9HD45 589 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 PPM1HQ9ULR3 514 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 DMTF1Q9Y222 760 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 PCDHGB2Q9Y5G2 931 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 DCHS1Q96JQ0 3298 aa20.95■□□□□ 0.94
SNX13-206ENST00000474067 NYNRINQ9P2P1 1898 aaKnown RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 PCDH15Q96QU1 1955 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 A0A1W2PQJ5 194 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 I6L893 689 aaPredicted RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 YKT6O15498 198 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 FGF10O15520 208 aaPredicted RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 BNIP3LO60238 219 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 RAMP2O60895 175 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 SERPINH1P50454 418 aaKnown RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 ZNF135P52742 658 aaPredicted RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 POLD3Q15054 466 aaPredicted RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 NEK5Q6P3R8 708 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 C22orf39Q6P5X5 142 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 OR52K2Q8NGK3 314 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 CASKIN2Q8WXE0 1202 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 SYN2Q92777 582 aaPredicted RBP20.94■□□□□ 0.94
SNX13-206ENST00000474067 LRIG1Q96JA1 1093 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 PSMB7Q99436 277 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 HAUS4Q9H6D7 363 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 GAREM1Q9H706 876 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 CBX8Q9HC52 389 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 WDR87Q6ZQQ6 2873 aa20.94■□□□□ 0.94
SNX13-206ENST00000474067 A0A0D9SEW6 157 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 CCP110O43303 1012 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 PLRG1O43660 514 aaKnown RBP20.93■□□□□ 0.94
SNX13-206ENST00000474067 RTN2O75298 545 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 LRIG2O94898 1065 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 RRM1P23921 792 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 CHRNA3P32297 505 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 YBEYP58557 167 aaPredicted RBP20.93■□□□□ 0.94
SNX13-206ENST00000474067 SHC2P98077 582 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 FANCCQ00597 558 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 MANEALQ5VSG8 457 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 PLPP6Q8IY26 295 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 OXR1Q8N573 874 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 AADATQ8N5Z0 425 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 DEFB124Q8NES8 71 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 C1orf216Q8TAB5 229 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 FAM131CQ96AQ9 280 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 ISG20Q96AZ6 181 aaKnown RBP20.93■□□□□ 0.94
SNX13-206ENST00000474067 IL36AQ9UHA7 158 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 SNX10Q9Y5X0 201 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 DOCK4Q8N1I0 1966 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 GON4LQ3T8J9 2241 aa20.93■□□□□ 0.94
SNX13-206ENST00000474067 VILLO15195 856 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 FLRT2O43155 660 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 SNAP91O60641 907 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 EPHB2P29323 1055 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 PMLP29590 882 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 CSNK1EP49674 416 aaKnown RBP20.92■□□□□ 0.94
SNX13-206ENST00000474067 OVGP1Q12889 678 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 SETMARQ53H47 684 aaPredicted RBP20.92■□□□□ 0.94
SNX13-206ENST00000474067 TDRD12Q587J7 1177 aaKnown RBP20.92■□□□□ 0.94
SNX13-206ENST00000474067 TMC6Q7Z403 805 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 PIP4P1Q86T03 277 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 OR7D4Q8NG98 312 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 FNIP1Q8TF40 1166 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 FSCN3Q9NQT6 498 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 AASDHPPTQ9NRN7 309 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 TMPRSS4Q9NRS4 437 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 TM7SF3Q9NS93 570 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 ANKRD6Q9Y2G4 727 aa20.92■□□□□ 0.94
SNX13-206ENST00000474067 A0A1B0GVT2 93 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 TCRBV5S1A1TA0A578 114 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 KPNA3O00505 521 aaPredicted RBP20.91■□□□□ 0.94
SNX13-206ENST00000474067 RNGTTO60942 597 aaKnown RBP20.91■□□□□ 0.94
SNX13-206ENST00000474067 IGHV4-34P06331 123 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 VAV1P15498 845 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 PSMA2P25787 234 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 DRD3P35462 400 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 CCT8P50990 548 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 RAD51Q06609 339 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 ACAP1Q15027 740 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 HLA-BQ31612 363 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 PPP1R15BQ5SWA1 713 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 PLEKHA7Q6IQ23 1121 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 LUZP1Q86V48 1076 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 TRIM69Q86WT6 500 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 ZNF354CQ86Y25 554 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 PSTKQ8IV42 348 aaKnown RBP20.91■□□□□ 0.94
SNX13-206ENST00000474067 NAXDQ8IW45 347 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms