RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 FGFR1OP2Q9NVK5 253 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TMEM51Q9NW97 253 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 GDAP2Q9NXN4 497 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 RRN3Q9NYV6 651 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CTNNAL1Q9UBT7 734 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CYTH4Q9UIA0 394 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 HEY1Q9Y5J3 304 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 RAD54BQ9Y620 910 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 USH1CQ9Y6N9 552 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ZSWIM8A7E2V4 1837 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 SMIM28A0A1B0GU29 152 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MBLAC1A4D2B0 266 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 I3L4J1 428 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TNFRSF10CO14798 259 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CAPN9O14815 690 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PPP1R12AO14974 1030 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 XPO1O14980 1071 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TP73O15350 636 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MTSS1O43312 755 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 LPXNO60711 386 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 GPR32O75388 356 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CSDE1O75534 798 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 DAB1O75553 588 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CLEC3AO75596 197 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 GRAP2O75791 330 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ENDOD1O94919 500 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CELF2O95319 508 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM200BP0CF97 657 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ALADP13716 330 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 LCP1P13796 627 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 AKR1A1P14550 325 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 EZRP15311 586 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 NME1P15531 152 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TPSB2P20231 275 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 WARSP23381 471 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CYP2F1P24903 491 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CNTFP26441 200 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 GARSP41250 739 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 LHX1P48742 406 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SULT1E1P49888 294 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MNAT1P51948 309 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CDK16Q00536 496 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TMEM62Q0P6H9 643 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 IFRD2Q12894 506 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 NAB1Q13506 487 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SNX17Q15036 470 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PDK1Q15118 436 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TPSAB1Q15661 275 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PKN2Q16513 984 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 DPYSL2Q16555 572 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PDK4Q16654 411 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 C15orf59Q2T9L4 293 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ARL13BQ3SXY8 428 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC45A4Q5BKX6 768 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MARCH8Q5T0T0 291 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 OLFML2BQ68BL8 750 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 RNF111Q6ZNA4 994 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC26A11Q86WA9 606 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 METTL23Q86XA0 190 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SPPL2CQ8IUH8 684 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 UNC45BQ8IWX7 931 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CTAGE3PQ8IX95 158 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CRYBG2Q8N1P7 616 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF655Q8N720 491 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PLD5Q8N7P1 536 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MCUQ8NE86 351 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CXorf38Q8TB03 319 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC35F5Q8WV83 523 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TFB1MQ8WVM0 346 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SREK1Q8WXA9 508 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MAML1Q92585 1016 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ATP2A3Q93084 1043 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM149B1Q96BN6 582 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ZBTB10Q96DT7 871 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 RTP4Q96DX8 246 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 MRRFQ96E11 262 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CFAP36Q96G28 342 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PWWP2AQ96N64 755 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 APBA2Q99767 749 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 NAT9Q9BTE0 207 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SNRNP25Q9BV90 132 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 KATNBL1Q9H079 304 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 NXF3Q9H4D5 531 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 NRDE2Q9H7Z3 1164 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 RXFP1Q9HBX9 757 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PCDH18Q9HCL0 1135 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC40A1Q9NP59 571 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 KLC4Q9NSK0 619 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 TUBGCP4Q9UGJ1 667 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 CHMP2BQ9UQN3 213 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNFX1Q9P2E3 1918 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 SBF1O95248 1867 aa6.05□□□□□ -1.44
ATPAF1-204ENST00000474020 PLXNB2O15031 1838 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SCN4AP35499 1836 aa6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 SF3B1O75533 1304 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 POLR2AP24928 1970 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-204ENST00000474020 KBTBD13C9JR72 458 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms