RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SLC8A1P32418 973 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 SERPINH1P50454 418 aaKnown RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 SLC25A11Q02978 314 aaKnown RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 PIGHQ14442 188 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 ACAP1Q15027 740 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 SMTNL2Q2TAL5 461 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 TTC31Q49AM3 519 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 KCNT1Q5JUK3 1230 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 PEAR1Q5VY43 1037 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-210ENST00000473829 C22orf39Q6P5X5 142 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 MRFAP1L1Q96HT8 127 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 KLC2Q9H0B6 622 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 MAGEH1Q9H213 219 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 IP6K2Q9UHH9 426 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 SPTBN4Q9H254 2564 aa19.35■□□□□ 0.69
PTCD3-210ENST00000473829 RNF103O00237 685 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 EEF2KO00418 725 aaKnown RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 FGF10O15520 208 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 IL1BP01584 269 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 CTSLP07711 333 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 H2AFZP0C0S5 128 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 ETFBP38117 255 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 LMNB2Q03252 620 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 POLD3Q15054 466 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 PPP6R3Q5H9R7 873 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 RETSATQ6NUM9 610 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 LEKR1Q6ZMV7 388 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 H2AFVQ71UI9 128 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 SYT12Q8IV01 421 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 OR2A12Q8NGT7 310 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 CTNNBL1Q8WYA6 563 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 HMCESQ96FZ2 354 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 CCDC42Q96M95 316 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 TNKS2Q9H2K2 1166 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 C6orf106Q9H6K1 298 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 CATSPERBQ9H7T0 1116 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 ZWILCHQ9H900 591 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 OSGEPQ9NPF4 335 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 FBXL12Q9NXK8 326 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 CTTNBP2NLQ9P2B4 639 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 SCML1Q9UN30 329 aa19.34■□□□□ 0.69
PTCD3-210ENST00000473829 FCF1Q9Y324 198 aaKnown RBP19.34■□□□□ 0.69
PTCD3-210ENST00000473829 PI4KAP42356 2102 aa19.33■□□□□ 0.69
PTCD3-210ENST00000473829 EIF3CLB5ME19 914 aaKnown RBP19.33■□□□□ 0.68
PTCD3-210ENST00000473829 PLK4O00444 970 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 MCF2LO15068 1137 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 TMEM253P0C7T8 217 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 MAOBP27338 520 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 HTR7P34969 479 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 DRD3P35462 400 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 CLCN6P51797 869 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 RFX8Q6ZV50 586 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 USP30Q70CQ3 517 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 PSTKQ8IV42 348 aaKnown RBP19.33■□□□□ 0.68
PTCD3-210ENST00000473829 UMODL1-AS1Q8N2C9 162 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 C12orf50Q8NA57 414 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-210ENST00000473829 CHST14Q8NCH0 376 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 CADM4Q8NFZ8 388 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 GANCQ8TET4 914 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 OR8D1Q8WZ84 308 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 RMDN1Q96DB5 314 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 EIF3CQ99613 913 aaKnown RBP19.33■□□□□ 0.68
PTCD3-210ENST00000473829 NCAPGQ9BPX3 1015 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 BTBD1Q9H0C5 482 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 NEUROG2Q9H2A3 272 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 UVRAGQ9P2Y5 699 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 PPM1HQ9ULR3 514 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 PCDH15Q96QU1 1955 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 ADAMTS9Q9P2N4 1935 aa19.33■□□□□ 0.68
PTCD3-210ENST00000473829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-210ENST00000473829 LNP1A1A4G5 178 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 METTL12A8MUP2 240 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 MEI4A8MW99 385 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 RASA4BC9J798 803 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 MYO1FO00160 1098 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 ALOX15BO15296 676 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 RASA4O43374 803 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 KDELR3O43731 214 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 RNASEH2AO75792 299 aaKnown RBP19.32■□□□□ 0.68
PTCD3-210ENST00000473829 SEMA4FO95754 770 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 ADH1BP00325 375 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 RARAP10276 462 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 C5AR1P21730 350 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 DPYSL2Q16555 572 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 POM121L1PQ3SYA9 428 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 AASDHQ4L235 1098 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-210ENST00000473829 DCAF12L1Q5VU92 463 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 HDDC3Q8N4P3 179 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 NETO2Q8NC67 525 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 PIP4K2CQ8TBX8 421 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 HSPH1Q92598 858 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 CELF6Q96J87 481 aaKnown RBP19.32■□□□□ 0.68
PTCD3-210ENST00000473829 LRRC19Q9H756 370 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 FSCN3Q9NQT6 498 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTCD3-210ENST00000473829 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
PTCD3-210ENST00000473829 MFHAS1Q9Y4C4 1052 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 SLCO1B1Q9Y6L6 691 aa19.32■□□□□ 0.68
PTCD3-210ENST00000473829 PROSCO94903 275 aa19.31■□□□□ 0.68
PTCD3-210ENST00000473829 ERCC2P18074 760 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms