RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PLA2G4CQ9UP65 541 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 HYOU1Q9Y4L1 999 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 DUSP10Q9Y6W6 482 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 THADAQ6YHU6 1953 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 CACNA1GO43497 2377 aa13.43□□□□□ -0.26
TPM3-216ENST00000473036 ATRXP46100 2492 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 TNRC6BQ9UPQ9 1833 aaKnown RBP13.42□□□□□ -0.26
TPM3-216ENST00000473036 TMEM110-MUSTN1A8MSY1 372 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 GDF9O60383 454 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 EPN2O95208 641 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 SRCP12931 536 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 MAPKAPK2P49137 400 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
TPM3-216ENST00000473036 MESDQ14696 234 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 SPA17Q15506 151 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 PPP6R3Q5H9R7 873 aaPredicted RBP13.42□□□□□ -0.26
TPM3-216ENST00000473036 C6orf118Q5T5N4 469 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 SDE2Q6IQ49 451 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 POLNQ7Z5Q5 900 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 KBTBD6Q86V97 674 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 CACUL1Q86Y37 369 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 PSTKQ8IV42 348 aaKnown RBP13.42□□□□□ -0.26
TPM3-216ENST00000473036 CCDC117Q8IWD4 279 aaPredicted RBP13.42□□□□□ -0.26
TPM3-216ENST00000473036 ARHGAP12Q8IWW6 846 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 SH2D3CQ8N5H7 860 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 KDM1BQ8NB78 822 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 ZC3H10Q96K80 434 aaKnown RBP13.42□□□□□ -0.26
TPM3-216ENST00000473036 FAM129BQ96TA1 746 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 EPAS1Q99814 870 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 LRRC19Q9H756 370 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.42□□□□□ -0.26
TPM3-216ENST00000473036 KLHL11Q9NVR0 708 aa13.42□□□□□ -0.26
TPM3-216ENST00000473036 EEF2KO00418 725 aaKnown RBP13.41□□□□□ -0.26
TPM3-216ENST00000473036 ATP9BO43861 1147 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 RPP40O75818 363 aaKnown RBP13.41□□□□□ -0.26
TPM3-216ENST00000473036 MOCS3O95396 460 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 PROS1P07225 676 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 ERCC2P18074 760 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 P2RY2P41231 377 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 METAP1P53582 386 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 TPI1P60174 286 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 RPS14P62263 151 aaKnown RBP13.41□□□□□ -0.26
TPM3-216ENST00000473036 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 BOLA3Q53S33 107 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 PLA2G2CQ5R387 149 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 N4BP2L1Q5TBK1 243 aaPredicted RBP13.41□□□□□ -0.26
TPM3-216ENST00000473036 AFMIDQ63HM1 303 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 ZNF783Q6ZMS7 281 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 RFX8Q6ZV50 586 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 TMPRSS6Q8IU80 811 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 UMODL1-AS1Q8N2C9 162 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 OR2T3Q8NH03 318 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 TEKT4Q8WW24 435 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 HMCESQ96FZ2 354 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
TPM3-216ENST00000473036 CSPG4P5Q96PW8 444 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 DESI2Q9BSY9 194 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 DUSP15Q9H1R2 295 aaPredicted RBP13.41□□□□□ -0.26
TPM3-216ENST00000473036 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
TPM3-216ENST00000473036 FRYQ5TBA9 3013 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 ZZEF1O43149 2961 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 BUB1BO60566 1050 aaPredicted RBP13.4□□□□□ -0.26
TPM3-216ENST00000473036 AMPD1P23109 780 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 MAN1A1P33908 653 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 HADHBP55084 474 aaKnown RBP13.4□□□□□ -0.26
TPM3-216ENST00000473036 OXCT1P55809 520 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 SULT2A1Q06520 285 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 DPYSL3Q14195 570 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 DLG2Q15700 870 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 STPG1Q5TH74 334 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 ARHGAP36Q6ZRI8 547 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 RHOT2Q8IXI1 618 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 STK40Q8N2I9 435 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 CELF6Q96J87 481 aaKnown RBP13.4□□□□□ -0.26
TPM3-216ENST00000473036 SLC39A8Q9C0K1 460 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 RSPH9Q9H1X1 276 aaPredicted RBP13.4□□□□□ -0.26
TPM3-216ENST00000473036 RETREG1Q9H6L5 497 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 PRDM16Q9HAZ2 1276 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 ATP13A1Q9HD20 1204 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 BCCIPQ9P287 314 aaKnown RBP eCLIP13.4□□□□□ -0.26
TPM3-216ENST00000473036 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
TPM3-216ENST00000473036 BAHCC1Q9P281 2608 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 IGHV1OR15-9A0A0B4J2B8 117 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 EDDM13A0A1B0GTR0 161 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 TMEM8BA6NDV4 472 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 C3orf70A6NLC5 250 aaPredicted RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 RASA4BC9J798 803 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 CBX4O00257 560 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 FGF10O15520 208 aaPredicted RBP13.39□□□□□ -0.27
TPM3-216ENST00000473036 PJA2O43164 708 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 RASA4O43374 803 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 KDELR3O43731 214 aa13.39□□□□□ -0.27
TPM3-216ENST00000473036 SYNCRIPO60506 623 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms