RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 FAM46CQ5VWP2 391 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 ADAT2Q7Z6V5 191 aaKnown RBP15.15■□□□□ 0.02
SSR4-208ENST00000471880 OR2I1PQ8NGU4 316 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 NTAN1Q96AB6 310 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 FAM129BQ96TA1 746 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 NEUROG2Q9H2A3 272 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 DEF6Q9H4E7 631 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 DHX35Q9H5Z1 703 aaKnown RBP15.15■□□□□ 0.02
SSR4-208ENST00000471880 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
SSR4-208ENST00000471880 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
SSR4-208ENST00000471880 TPRP12270 2363 aaKnown RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3DA0A087WVF3 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3IA0A087WXS9 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3EA0A087X179 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3KA0A087X1G2 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 A0A1B0GTW7 788 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3FA6NER0 549 aaPredicted RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3LB9A6J9 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 KPNA3O00505 521 aaPredicted RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 BCAT2O15382 392 aaPredicted RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 DAPK3O43293 454 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 ATP9BO43861 1147 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 PRPSAP2O60256 369 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 RAMP2O60895 175 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 IGLV3-19P01714 112 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 SYPP08247 313 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3HP0C7X1 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 MYBL1P10243 752 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 ETFBP38117 255 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 SSR1P43307 286 aaKnown RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 MAPKAPK2P49137 400 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 LIMK1P53667 647 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TPI1P60174 286 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 ARID5BQ14865 1188 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3GQ6DHY5 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3CQ6IPX1 549 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 PLEKHA7Q6IQ23 1121 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 C22orf39Q6P5X5 142 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 NCEH1Q6PIU2 408 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 ZNF783Q6ZMS7 281 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 USP30Q70CQ3 517 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TBC1D3Q8IZP1 549 aaPredicted RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 AADATQ8N5Z0 425 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 PIP4K2CQ8TBX8 421 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 GRIN3AQ8TCU5 1115 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 FRS2Q8WU20 508 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 TRIM7Q9C029 511 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 DYRK4Q9NR20 520 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 NDFIP2Q9NV92 336 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 ZNHIT6Q9NWK9 470 aaKnown RBP15.14■□□□□ 0.01
SSR4-208ENST00000471880 FZD10Q9ULW2 581 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 AP4E1Q9UPM8 1137 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 PLXNA2O75051 1894 aa15.14■□□□□ 0.01
SSR4-208ENST00000471880 CABIN1Q9Y6J0 2220 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 TM4SF5O14894 197 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 SMAD6O43541 496 aaKnown RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 GOT1P17174 413 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 METAP1P53582 386 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 GALCP54803 685 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 NRG1Q02297 640 aaPredicted RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 POLD3Q15054 466 aaPredicted RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 PPP6R3Q5H9R7 873 aaPredicted RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 ARTNQ5T4W7 220 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 MANEALQ5VSG8 457 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 PEAR1Q5VY43 1037 aaPredicted RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 KIAA0895LQ68EN5 471 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 MINDY1Q8N5J2 469 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 SYN2Q92777 582 aaPredicted RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 BIRC7Q96CA5 298 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 TM6SF2Q9BZW4 377 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 CATSPERBQ9H7T0 1116 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 TMEM248Q9NWD8 314 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 SARDHQ9UL12 918 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 HS3ST2Q9Y278 367 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 FCF1Q9Y324 198 aaKnown RBP15.13■□□□□ 0.01
SSR4-208ENST00000471880 ACTL7AQ9Y615 435 aa15.13■□□□□ 0.01
SSR4-208ENST00000471880 TMEM191CA6NGB0 347 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 EEF2KO00418 725 aaKnown RBP15.12■□□□□ 0.01
SSR4-208ENST00000471880 ARHGAP33O14559 1287 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 MCF2LO15068 1137 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 BUB1O43683 1085 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 L1CAMP32004 1257 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 CHRNA3P32297 505 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 CLCN6P51797 869 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 AIF1P55008 147 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 SCAPQ12770 1279 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 TEAD4Q15561 434 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 HGSNATQ68CP4 663 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 SPECC1LQ69YQ0 1117 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 NLRP14Q86W24 1093 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 CHST14Q8NCH0 376 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 OR2T34Q8NGX1 318 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 DNASE2BQ8WZ79 361 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 ARHGEF2Q92974 986 aaKnown RBP15.12■□□□□ 0.01
SSR4-208ENST00000471880 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 PCED1AQ9H1Q7 454 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 CAPN10Q9HC96 672 aa15.12■□□□□ 0.01
SSR4-208ENST00000471880 AASDHPPTQ9NRN7 309 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms