RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SALL4Q9UJQ4 1053 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 SCML1Q9UN30 329 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 SDK1Q7Z5N4 2213 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
SNX13-205ENST00000471744 ABCA7Q8IZY2 2146 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 LRRD1A4D1F6 860 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 ALOX15BO15296 676 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 SIN3BO75182 1162 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 SRCP12931 536 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 AMPD1P23109 780 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 PXNP49023 591 aaPredicted RBP15.43■□□□□ 0.06
SNX13-205ENST00000471744 ARF5P84085 180 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 NHLH1Q02575 133 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 DMWDQ09019 674 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 ATP13A4Q4VNC1 1196 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 C9orf64Q5T6V5 341 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 AFMIDQ63HM1 303 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 ZNF776Q68DI1 518 aaPredicted RBP15.43■□□□□ 0.06
SNX13-205ENST00000471744 ZNF662Q6ZS27 426 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 LRRC49Q8IUZ0 686 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 PCDH20Q8N6Y1 951 aaKnown RBP15.43■□□□□ 0.06
SNX13-205ENST00000471744 ZNF366Q8N895 744 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 PTPRN2Q92932 1015 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 ISG20Q96AZ6 181 aaKnown RBP15.43■□□□□ 0.06
SNX13-205ENST00000471744 FAF2Q96CS3 445 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 SIPA1Q96FS4 1042 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 HMCESQ96FZ2 354 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 PDLIM2Q96JY6 352 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 KLC2Q9H0B6 622 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 THADAQ6YHU6 1953 aa15.43■□□□□ 0.06
SNX13-205ENST00000471744 MACROD2A1Z1Q3 448 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 RPP40O75818 363 aaKnown RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 MT-CO1P00395 513 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 KRT1P04264 644 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 ACADMP11310 421 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 GLDCP23378 1020 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 IL4RP24394 825 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 RECQLP46063 649 aaPredicted RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 NUMBP49757 651 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 COPAP53621 1224 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 TTC31Q49AM3 519 aaPredicted RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 INO80DQ53TQ3 878 aaPredicted RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 ANKRD20A8PQ5CZ79 823 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 C22orf39Q6P5X5 142 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 KIAA1324Q6UXG2 1013 aaKnown RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 PLPP6Q8IY26 295 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 OR8D1Q8WZ84 308 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 RAPGEF5Q92565 580 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 TPSD1Q9BZJ3 242 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 MKRN2Q9H000 416 aaKnown RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 RSPH9Q9H1X1 276 aaPredicted RBP15.42■□□□□ 0.06
SNX13-205ENST00000471744 CEP192Q8TEP8 1941 aa15.42■□□□□ 0.06
SNX13-205ENST00000471744 GON4LQ3T8J9 2241 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 CCDC66A2RUB6 948 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 PROB1E7EW31 1015 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 DFFAO00273 331 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 PRAMEF11O60813 436 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 DNTTP04053 509 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 CD48P09326 243 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 TNNT1P13805 278 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 ZFXP17010 805 aaPredicted RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 P2RY2P41231 377 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 PAPOLAP51003 745 aaKnown RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 MMRN1Q13201 1228 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 PAFAH1B3Q15102 231 aaKnown RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 LINGO4Q6UY18 593 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 SLC36A4Q6YBV0 504 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 CEP68Q76N32 757 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 ARHGAP12Q8IWW6 846 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 KATNAL2Q8IYT4 538 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 NPWQ8N729 165 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 LRRC57Q8N9N7 239 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 PCDH19Q8TAB3 1148 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 RBM41Q96IZ5 413 aaKnown RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 CELF6Q96J87 481 aaKnown RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 RNF157Q96PX1 679 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 MAK16Q9BXY0 300 aaKnown RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 SLC39A8Q9C0K1 460 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 EPC1Q9H2F5 836 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 SP110Q9HB58 689 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 KLHL11Q9NVR0 708 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 UBA2Q9UBT2 640 aaPredicted RBP15.41■□□□□ 0.06
SNX13-205ENST00000471744 RAB23Q9ULC3 237 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 HYOU1Q9Y4L1 999 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 R4GN57 208 aa15.41■□□□□ 0.06
SNX13-205ENST00000471744 GRID2IPA4D2P6 1211 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 MIF4GDA9UHW6 222 aaKnown RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 C1QTNF3-AMACRE9PGA6 284 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 MCF2LO15068 1137 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 HRO43593 1189 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 ZRANB2O95218 330 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX13-205ENST00000471744 ADH1BP00325 375 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 OXTRP30559 389 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 RPS14P62263 151 aaKnown RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 SNRPD1P62314 119 aaKnown RBP15.4■□□□□ 0.06
SNX13-205ENST00000471744 IL10RBQ08334 325 aa15.4■□□□□ 0.06
SNX13-205ENST00000471744 SIM2Q14190 667 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms