RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 NADSYN1Q6IA69 706 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 SULT6B1Q6IMI4 303 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 PGBD2Q6P3X8 592 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 KLHL17Q6TDP4 642 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 FAM83HQ6ZRV2 1179 aaPredicted RBP1.57□□□□□ -2.16
UBXN4-207ENST00000471246 TOGARAM2Q6ZUX3 1019 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 CAMK1DQ8IU85 385 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 SCN4BQ8IWT1 228 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 CCDC146Q8IYE0 955 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 DCP1BQ8IZD4 617 aaKnown RBP1.57□□□□□ -2.16
UBXN4-207ENST00000471246 HORMAD2Q8N7B1 307 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ATG16L2Q8NAA4 619 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 SVIPQ8NHG7 77 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 C2CD4CQ8TF44 421 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 NUDCD2Q8WVJ2 157 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ADAMTS14Q8WXS8 1223 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 KCNJ9Q92806 393 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ARRDC3Q96B67 414 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 C3orf49Q96BT1 292 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 FRG2BQ96QU4 278 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 PIGSQ96S52 555 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 RMDN3Q96TC7 470 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 IFT27Q9BW83 186 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 TRIM31Q9BZY9 425 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 WDR12Q9GZL7 423 aaKnown RBP1.57□□□□□ -2.16
UBXN4-207ENST00000471246 CLPBQ9H078 707 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 BRD8Q9H0E9 1235 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 PABPC3Q9H361 631 aaKnown RBP1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ABHD16BQ9H3Z7 469 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 HIPK3Q9H422 1215 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 SLC22A11Q9NSA0 550 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 TMEM248Q9NWD8 314 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ZDHHC7Q9NXF8 308 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 DACT1Q9NYF0 836 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 NDUFAF4Q9P032 175 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 LRFN1Q9P244 771 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 UPB1Q9UBR1 384 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 PLEKHB1Q9UF11 243 aaPredicted RBP1.57□□□□□ -2.16
UBXN4-207ENST00000471246 HERC5Q9UII4 1024 aaKnown RBP1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ICKQ9UPZ9 632 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 LRCH1Q9Y2L9 728 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 RAP2CQ9Y3L5 183 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 SLC4A4Q9Y6R1 1079 aa1.57□□□□□ -2.16
UBXN4-207ENST00000471246 ABHD14A-ACY1A0A1B0GW23 586 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CLEC18AA5D8T8 446 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 TMEM247A6NEH6 219 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 FAM90A20PA6NIJ5 464 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 C17orf100A8MU93 164 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 MS4A18H0YCH9 400 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 VWA5AO00534 786 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 ACOT8O14734 319 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 SYN3O14994 580 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 HNRNPRO43390 633 aaKnown RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 LDB2O43679 373 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CCNT1O60563 726 aaKnown RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 DDAH2O95865 285 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CSF1P09603 554 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 SETSIPP0DME0 302 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 FCGR2AP12318 317 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 ACP5P13686 325 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 HOXB9P17482 250 aaPredicted RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 PRKCHP24723 683 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 MT3P25713 68 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 HOXD3P31249 432 aaPredicted RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 THPOP40225 353 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CLCNKBP51801 687 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 ART1P52961 327 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 GAS1P54826 345 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 RRP1P56182 461 aaKnown RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 ICA1Q05084 483 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 ALKBH1Q13686 389 aaKnown RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 NFATC4Q14934 902 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 IZUMO4Q1ZYL8 232 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 PLK5Q496M5 336 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 SYTL3Q4VX76 610 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 FSCBQ5H9T9 825 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 PRAMEF19Q5SWL8 479 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 SYCP2LQ5T4T6 812 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 C9orf57Q5W0N0 161 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 HEPHL1Q6MZM0 1159 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 FBXL22Q6P050 247 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 C8orf82Q6P1X6 216 aaPredicted RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 MTFR2Q6P444 385 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 RRAGAQ7L523 313 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 GALNT7Q86SF2 657 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 WDR5BQ86VZ2 330 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 NR2C2APQ86WQ0 139 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CACNA2D3Q8IZS8 1091 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 PTGR2Q8N8N7 351 aaPredicted RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 SCAIQ8N9R8 606 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CLEC18CQ8NCF0 446 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 CEP76Q8TAP6 659 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 STT3BQ8TCJ2 826 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 HDAC7Q8WUI4 952 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 TMEM255BQ8WV15 326 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 FAR1Q8WVX9 515 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 LMLNQ96KR4 655 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 TM6SF1Q9BZW5 370 aa1.56□□□□□ -2.16
UBXN4-207ENST00000471246 C6orf106Q9H6K1 298 aaPredicted RBP1.56□□□□□ -2.16
UBXN4-207ENST00000471246 ACAD9Q9H845 621 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms