RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 BRD9Q9H8M2 597 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 ARFGAP3Q9NP61 516 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 EPS15L1Q9UBC2 864 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 ZNF212Q9UDV6 495 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 SLC25A13Q9UJS0 675 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 RAB21Q9UL25 225 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 NFU1Q9UMS0 254 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 SLC8A2Q9UPR5 921 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 SHOC2Q9UQ13 582 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 AAR2Q9Y312 384 aaKnown RBP9.96□□□□□ -0.82
CCM2-204ENST00000470837 NEU2Q9Y3R4 380 aa9.96□□□□□ -0.82
CCM2-204ENST00000470837 TRIOBPQ9H2D6 2365 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 J3KR12 359 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 CHADO15335 359 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 HOXC11O43248 304 aaPredicted RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 ANXA9O76027 345 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 CYP17A1P05093 508 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 PABPC1P11940 636 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 POLR2EP19388 210 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 GDI1P31150 447 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 HSPA9P38646 679 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 CARSP49589 748 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 DGKGP49619 791 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 ARL4CP56559 192 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 CDK16Q00536 496 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 SLC20A2Q08357 652 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 WASHC5Q12768 1159 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 LMAN2Q12907 356 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 GRM2Q14416 872 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 HABP4Q5JVS0 413 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 TRIM68Q6AZZ1 485 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 EMBQ6PCB8 327 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 RHBDF2Q6PJF5 856 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 VITQ6UXI7 678 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 ARHGAP36Q6ZRI8 547 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 PRUNE1Q86TP1 453 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 CCDC25Q86WR0 208 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 AHI1Q8N157 1196 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 NAT16Q8N8M0 369 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 GLIS1Q8NBF1 620 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 RIN3Q8TB24 985 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 WFIKKN2Q8TEU8 576 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 SEC14L1Q92503 715 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 SUSD6Q92537 303 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 NXPE3Q969Y0 559 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 TEKT5Q96M29 485 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 ACE2Q9BYF1 805 aaPredicted RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 POLR1EQ9GZS1 481 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 GBA3Q9H227 469 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 ECT2Q9H8V3 914 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 NT5MQ9NPB1 228 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 DNAJC17Q9NVM6 304 aaKnown RBP9.95□□□□□ -0.82
CCM2-204ENST00000470837 DEC1Q9P2X7 70 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 GGA2Q9UJY4 613 aa9.95□□□□□ -0.82
CCM2-204ENST00000470837 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 ERI2A8K979 691 aaKnown RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 AP3B1O00203 1094 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 MBTPS2O43462 519 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 CACNG3O60359 315 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ATP5BP06576 529 aaKnown RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 ARSAP15289 507 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 CA4P22748 312 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 CES1P23141 567 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 FCARP24071 287 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 PSMB4P28070 264 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 MZF1P28698 734 aaPredicted RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 GEMP55040 296 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 FCHO2Q0JRZ9 810 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ZBTB17Q13105 803 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 RUNX3Q13761 415 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 SLMAPQ14BN4 828 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 E2F5Q15329 346 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 PLEKHG6Q3KR16 790 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ITPRIPL2Q3MIP1 535 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 INO80DQ53TQ3 878 aaPredicted RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 DNAJC21Q5F1R6 531 aaKnown RBP9.94□□□□□ -0.82
CCM2-204ENST00000470837 FSCBQ5H9T9 825 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 PITRM1Q5JRX3 1037 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ARTNQ5T4W7 220 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 FAXCQ5TGI0 409 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 GRAMD4Q6IC98 578 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 PARM1Q6UWI2 310 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 LEKR1Q6ZMV7 388 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 CENPUQ71F23 418 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 PDIK1LQ8N165 341 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCM2-204ENST00000470837 PAF1Q8N7H5 531 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ATP11CQ8NB49 1132 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 FBXO25Q8TCJ0 367 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 MAML1Q92585 1016 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ART4Q93070 314 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 RSPRY1Q96DX4 576 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 ZFYVE19Q96K21 471 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 LRRC3BQ96PB8 259 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 IL12RB2Q99665 862 aa9.94□□□□□ -0.82
CCM2-204ENST00000470837 FAM83CQ9BQN1 747 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms