RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PARP15Q460N3 678 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 DENND2CQ68D51 928 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 RNF43Q68DV7 783 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 LRIG3Q6UXM1 1119 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 C4orf22Q6V702 233 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 CENPUQ71F23 418 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 PRPF39Q86UA1 669 aaKnown RBP8.49□□□□□ -1.05
GTF3A-206ENST00000470606 ARID3BQ8IVW6 561 aaPredicted RBP8.49□□□□□ -1.05
GTF3A-206ENST00000470606 TNS4Q8IZW8 715 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 SH2D3CQ8N5H7 860 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 TEX26Q8N6G2 289 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 SMG7Q92540 1137 aaKnown RBP8.49□□□□□ -1.05
GTF3A-206ENST00000470606 TIFAQ96CG3 184 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 PABPC5Q96DU9 382 aaKnown RBP8.49□□□□□ -1.05
GTF3A-206ENST00000470606 MRPL38Q96DV4 380 aaKnown RBP8.49□□□□□ -1.05
GTF3A-206ENST00000470606 APOL2Q9BQE5 337 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 IGFLR1Q9H665 355 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 GLOD4Q9HC38 313 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 TDP1Q9NUW8 608 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 EURLQ9NYK6 297 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 CTNNAL1Q9UBT7 734 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 RSPH14Q9UHP6 348 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 TRHDEQ9UKU6 1024 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 CHMP2BQ9UQN3 213 aa8.49□□□□□ -1.05
GTF3A-206ENST00000470606 MTSS1O43312 755 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SNAP91O60641 907 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 XYLBO75191 536 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 STK10O94804 968 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SUN1O94901 812 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 AP2A1O95782 977 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LATS1O95835 1130 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 POU2F2P09086 479 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 AVPR1AP37288 418 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ETFBP38117 255 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SLCO1A2P46721 670 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 RGRP47804 291 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 YBEYP58557 167 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ARF5P84085 180 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 IL10RBQ08334 325 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 HNRNPDQ14103 355 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ZNF77Q15935 545 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LONRF1Q17RB8 773 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 RABGAP1LQ5R372 815 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 KCTD16Q68DU8 428 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 DENND5AQ6IQ26 1287 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SYCE2Q6PIF2 218 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TPGS1Q6ZTW0 290 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 CHST9Q7L1S5 443 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TMEM25Q86YD3 366 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LRRC49Q8IUZ0 686 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 PDIK1LQ8N165 341 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 KRT222Q8N1A0 295 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 OR52K1Q8NGK4 314 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ARRDC2Q8TBH0 407 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 FATE1Q969F0 183 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TMA16Q96EY4 203 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LMLNQ96KR4 655 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 FCRL5Q96RD9 977 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 VAT1Q99536 393 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ACE2Q9BYF1 805 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 PHACTR1Q9C0D0 580 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TSPYL1Q9H0U9 437 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 MAGEH1Q9H213 219 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TMBIM4Q9HC24 238 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 EIF2B3Q9NR50 452 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TTLL3Q9Y4R7 772 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 F5P12259 2224 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ILVBLA1L0T0 632 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 E7EVH7 732 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SMAPO00193 183 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 RNF40O75150 1001 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LUC7L3O95232 432 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 AGTP01019 485 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 PFKLP17858 780 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ADRA1AP35348 466 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 VIPR2P41587 438 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 DSC2Q02487 901 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 DLX2Q07687 328 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TNK2Q07912 1038 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ZNF177Q13360 481 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TNFAIP8L3Q5GJ75 292 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TCEAL5Q5H9L2 206 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 FYB2Q5VWT5 728 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 RNF219Q5W0B1 726 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ASTLQ6HA08 431 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TRMT10BQ6PF06 316 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 LINGO4Q6UY18 593 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 MICALCLQ6ZW33 695 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 SETD3Q86TU7 594 aaPredicted RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 UNC5BQ8IZJ1 945 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 APCDD1Q8J025 514 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 CYP4X1Q8N118 509 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 CPXM2Q8N436 756 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 CARNMT1Q8N4J0 409 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 TDRD5Q8NAT2 981 aaKnown RBP8.48□□□□□ -1.05
GTF3A-206ENST00000470606 PYROXD1Q8WU10 500 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ATP2A3Q93084 1043 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 ASIC4Q96FT7 647 aa8.48□□□□□ -1.05
GTF3A-206ENST00000470606 MRGPRX2Q96LB1 330 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms