RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
SND1-208ENST00000470463 FSD1LQ9BXM9 530 aa11.2□□□□□ -0.62
SND1-208ENST00000470463 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
SND1-208ENST00000470463 RBM22Q9NW64 420 aaKnown RBP eCLIP11.2□□□□□ -0.627e-12■■■□□ 16.9
SND1-208ENST00000470463 NSMCE4AQ9NXX6 385 aa11.2□□□□□ -0.62
SND1-208ENST00000470463 NKIRAS1Q9NYS0 192 aa11.2□□□□□ -0.62
SND1-208ENST00000470463 CXXC1Q9P0U4 656 aaPredicted RBP11.2□□□□□ -0.62
SND1-208ENST00000470463 ZNF212Q9UDV6 495 aa11.2□□□□□ -0.62
SND1-208ENST00000470463 KIAA1671Q9BY89 1806 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 DNAH12Q6ZR08 3092 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 FAM237BA0A1B0GVD1 139 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 PRAMEF11O60813 436 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 AVILO75366 819 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 FAM155BO75949 473 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 USP1O94782 785 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 ALDH1A2O94788 518 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 PTPN2P17706 415 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 GABRR2P28476 465 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 CD68P34810 354 aaPredicted RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 EPHA5P54756 1037 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 GYS2P54840 703 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 GNGT1P63211 74 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 GNA12Q03113 381 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 GAD2Q05329 585 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 TMED2Q15363 201 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 SKIDA1Q1XH10 827 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 ALFQ53S48 1182 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 HP1BP3Q5SSJ5 553 aaPredicted RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 UNC5AQ6ZN44 842 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 HTR3DQ70Z44 454 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 TFAP2DQ7Z6R9 452 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 TRABD2AQ86V40 505 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 EXOC3L1Q86VI1 746 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 TP53INP2Q8IXH6 220 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 FAM217AQ8IXS0 508 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 CPXM2Q8N436 756 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 CNTD1Q8N815 330 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 KIAA1958Q8N8K9 716 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 HJURPQ8NCD3 748 aaPredicted RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 SPPL3Q8TCT6 385 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 MICAL1Q8TDZ2 1067 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 HMCESQ96FZ2 354 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 CFAP36Q96G28 342 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 TGS1Q96RS0 853 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 TBL1YQ9BQ87 522 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 PRKD2Q9BZL6 878 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 POLR1EQ9GZS1 481 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 NOL6Q9H6R4 1146 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 IL21Q9HBE4 155 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 MRM3Q9HC36 420 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 ZDHHC7Q9NXF8 308 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 MOCS1Q9NZB8 636 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 AGO1Q9UL18 857 aaKnown RBP11.19□□□□□ -0.62
SND1-208ENST00000470463 TBC1D30Q9Y2I9 924 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
SND1-208ENST00000470463 DOCK4Q8N1I0 1966 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 TMEM265A0A087WTH1 108 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 LINC01553A4QN01 128 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 FAM159BA6NKW6 160 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 ZNF197O14709 1029 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 PRPF4O43172 522 aaKnown RBP eCLIP11.18□□□□□ -0.62
SND1-208ENST00000470463 CNTN5O94779 1100 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 EPOP01588 193 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 BRAFP15056 766 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 FOSL2P15408 326 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 PAMP19021 973 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 ATP1A2P50993 1020 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 IRAK1P51617 712 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 CLCN4P51793 760 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 ZNF235Q14590 738 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 LBRQ14739 615 aaKnown RBP11.18□□□□□ -0.62
SND1-208ENST00000470463 SHHQ15465 462 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 RALGPS1Q5JS13 557 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 PCID2Q5JVF3 399 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 CAPN12Q6ZSI9 719 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 TMEM150AQ86TG1 271 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 TMC8Q8IU68 726 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 IMP4Q96G21 291 aaKnown RBP11.18□□□□□ -0.62
SND1-208ENST00000470463 SELENOSQ9BQE4 189 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 WDR83Q9BRX9 315 aaKnown RBP11.18□□□□□ -0.62
SND1-208ENST00000470463 CEP41Q9BYV8 373 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 RNF38Q9H0F5 515 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 ATXN3LQ9H3M9 355 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 CCDC134Q9H6E4 229 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 ARNT2Q9HBZ2 717 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 TRPC7Q9HCX4 862 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 NDFIP2Q9NV92 336 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 TXNDC16Q9P2K2 825 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 SEPT3Q9UH03 358 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 SH3BP1Q9Y3L3 701 aa11.18□□□□□ -0.62
SND1-208ENST00000470463 ZFP37Q9Y6Q3 630 aaPredicted RBP11.18□□□□□ -0.62
SND1-208ENST00000470463 FAM47DPA6NHR8 397 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms