RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CA5BQ9Y2D0 317 aa25.09■■□□□ 1.61
PTCH1-210ENST00000468211 TDRD6O60522 2096 aaKnown RBP25.08■■□□□ 1.61
PTCH1-210ENST00000468211 KNTC1P50748 2209 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 IGLV3-10A0A075B6K4 115 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 E9PAM4 449 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 C1QTNF3-AMACRE9PGA6 284 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 F9P00740 461 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 ITGAVP06756 1048 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 EPHA8P29322 1005 aaPredicted RBP25.08■■□□□ 1.61
PTCH1-210ENST00000468211 KLK7P49862 253 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 NOMO3P69849 1222 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 PIP5KL1Q5T9C9 394 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 NAA35Q5VZE5 725 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 TRIM69Q86WT6 500 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 EID2Q8N6I1 236 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 MFSD2AQ8NA29 543 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 ATP11CQ8NB49 1132 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 CHST14Q8NCH0 376 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 OR7D4Q8NG98 312 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 ARRDC3Q96B67 414 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 C1orf74Q96LT6 269 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 STK33Q9BYT3 514 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 GANQ9H2C0 597 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 ZNF212Q9UDV6 495 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 TPX2Q9ULW0 747 aaKnown RBP25.08■■□□□ 1.61
PTCH1-210ENST00000468211 LHX6Q9UPM6 363 aa25.08■■□□□ 1.61
PTCH1-210ENST00000468211 MYLKQ15746 1914 aa25.08■■□□□ 1.6
PTCH1-210ENST00000468211 CHD5Q8TDI0 1954 aa25.07■■□□□ 1.6
PTCH1-210ENST00000468211 LSM8O95777 96 aaKnown RBP25.07■■□□□ 1.6
PTCH1-210ENST00000468211 HOXB3P14651 431 aaPredicted RBP25.07■■□□□ 1.6
PTCH1-210ENST00000468211 CLDN6P56747 220 aa25.07■■□□□ 1.6
PTCH1-210ENST00000468211 KRT83P78385 493 aa25.07■■□□□ 1.6
PTCH1-210ENST00000468211 DNAJC3Q13217 504 aa25.07■■□□□ 1.6
PTCH1-210ENST00000468211 CAMK2BQ13554 666 aa25.07■■□□□ 1.6
PTCH1-210ENST00000468211 SMAD1Q15797 465 aaKnown RBP25.07■■□□□ 1.6
PTCH1-210ENST00000468211 INAVAQ3KP66 663 aa25.07■■□□□ 1.6
PTCH1-210ENST00000468211 SETD3Q86TU7 594 aaPredicted RBP25.07■■□□□ 1.6
PTCH1-210ENST00000468211 C2orf49Q9BVC5 232 aaPredicted RBP25.07■■□□□ 1.6
PTCH1-210ENST00000468211 NOCTQ9UK39 431 aaKnown RBP25.07■■□□□ 1.6
PTCH1-210ENST00000468211 ENC1O14682 589 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 SRGAP2O75044 1071 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 EEF1GP26641 437 aaKnown RBP25.06■■□□□ 1.6
PTCH1-210ENST00000468211 CHRNA3P32297 505 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 SLC45A4Q5BKX6 768 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 LRRC31Q6UY01 552 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 KANSL1Q7Z3B3 1105 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 FAM131BQ86XD5 332 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 GALNT15Q8N3T1 639 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 EMC1Q8N766 993 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 DCAF4L2Q8NA75 395 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 KLK6Q92876 244 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 CNDP2Q96KP4 475 aaKnown RBP25.06■■□□□ 1.6
PTCH1-210ENST00000468211 TNKS2Q9H2K2 1166 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 ERVMER34-1Q9H9K5 563 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 DMTF1Q9Y222 760 aa25.06■■□□□ 1.6
PTCH1-210ENST00000468211 TRPM6Q9BX84 2022 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 TRABD2BA6NFA1 517 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 ZNF821O75541 412 aaPredicted RBP25.05■■□□□ 1.6
PTCH1-210ENST00000468211 GFPT2O94808 682 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 LDOC1O95751 146 aaPredicted RBP25.05■■□□□ 1.6
PTCH1-210ENST00000468211 CHRNB2P17787 502 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 OR1E1P30953 314 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 RXRGP48443 463 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 C19orf48Q6RUI8 117 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 PHLDB2Q86SQ0 1253 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 VPS16Q9H269 839 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 METTL5Q9NRN9 209 aaKnown RBP25.05■■□□□ 1.6
PTCH1-210ENST00000468211 GPSM3Q9Y4H4 160 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 PAXBP1Q9Y5B6 917 aa25.05■■□□□ 1.6
PTCH1-210ENST00000468211 KPNA3O00505 521 aaPredicted RBP25.04■■□□□ 1.6
PTCH1-210ENST00000468211 EPHB6O15197 1021 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 RNGTTO60942 597 aaKnown RBP25.04■■□□□ 1.6
PTCH1-210ENST00000468211 ZMPSTE24O75844 475 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 ENDOD1O94919 500 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 PRLRP16471 622 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 ARRB1P49407 418 aaPredicted RBP25.04■■□□□ 1.6
PTCH1-210ENST00000468211 ATP11AP98196 1134 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 C6orf118Q5T5N4 469 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 SFMBT2Q5VUG0 894 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 C22orf39Q6P5X5 142 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 IQCHQ86VS3 1027 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 TMIEQ8NEW7 156 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 HAPLN3Q96S86 360 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 MYOCQ99972 504 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 CAAP1Q9H8G2 361 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 PREBQ9HCU5 417 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 LMBRD1Q9NUN5 540 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 RAXQ9Y2V3 346 aa25.04■■□□□ 1.6
PTCH1-210ENST00000468211 SLC31A1O15431 190 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 YKT6O15498 198 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 CYP1A1P04798 512 aaPredicted RBP25.03■■□□□ 1.6
PTCH1-210ENST00000468211 STAT4Q14765 748 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 KRT31Q15323 416 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 SETMARQ53H47 684 aaPredicted RBP25.03■■□□□ 1.6
PTCH1-210ENST00000468211 ARSIQ5FYB1 569 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 CDKAL1Q5VV42 579 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 DPY19L3Q6ZPD9 716 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 GRIN3AQ8TCU5 1115 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 TSC1Q92574 1164 aa25.03■■□□□ 1.6
PTCH1-210ENST00000468211 SPON2Q9BUD6 331 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms