RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 CKAP5Q14008 2032 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 SPAG17Q6Q759 2223 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 ZSCAN5CA6NGD5 496 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 BUB1O43683 1085 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 RNASEH1O60930 286 aaKnown RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 ZNF821O75541 412 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 CD48P09326 243 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 VAV1P15498 845 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 KDELR1P24390 212 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 GEMIN4P57678 1058 aaKnown RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 MMRN1Q13201 1228 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 DPYSL3Q14195 570 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 C11orf74Q86VG3 221 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 PLPP6Q8IY26 295 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 TXLNBQ8N3L3 684 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 FRMD1Q8N878 549 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 CELF6Q96J87 481 aaKnown RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 ZC3H10Q96K80 434 aaKnown RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 DESI2Q9BSY9 194 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 CEP44Q9C0F1 390 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 ETNK2Q9NVF9 386 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 MBD1Q9UIS9 605 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 HYOU1Q9Y4L1 999 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 CHD5Q8TDI0 1954 aa13.9□□□□□ -0.18
SSBP1-206ENST00000467681 ZFHX2Q9C0A1 2572 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-206ENST00000467681 ARHGAP42A6NI28 874 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 MCF2LO15068 1137 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ARHGAP6O43182 974 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 MAP3K13O43283 966 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 SPOPO43791 374 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 IGLV3-19P01714 112 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 OXTRP30559 389 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 GJC1P36383 396 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 PAPOLAP51003 745 aaKnown RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ELAVL3Q14576 367 aaKnown RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 NUMA1Q14980 2115 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 PLK5Q496M5 336 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 INO80DQ53TQ3 878 aaPredicted RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ANKRD20A8PQ5CZ79 823 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF776Q68DI1 518 aaPredicted RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 C11orf63Q6NUN7 778 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 TMCO3Q6UWJ1 677 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 PRR23BQ6ZRT6 265 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 KBTBD6Q86V97 674 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ARHGAP12Q8IWW6 846 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 RHOT1Q8IXI2 618 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 FAM160A2Q8N612 972 aaPredicted RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 NPWQ8N729 165 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 PCDH19Q8TAB3 1148 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 CASKIN2Q8WXE0 1202 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ISG20Q96AZ6 181 aaKnown RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 FAF2Q96CS3 445 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF670Q9BS34 389 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 CALN1Q9BXU9 219 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
SSBP1-206ENST00000467681 PPM1HQ9ULR3 514 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 ACTL7AQ9Y615 435 aa13.89□□□□□ -0.19
SSBP1-206ENST00000467681 IGHV1OR15-9A0A0B4J2B8 117 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 C3orf70A6NLC5 250 aaPredicted RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF487B1APH4 448 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 ALOX15BO15296 676 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 PRAMEF11O60813 436 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 RHOBTB1O94844 696 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 ACADMP11310 421 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 BCKDHBP21953 392 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 SLC8A1P32418 973 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 PLA2G5P39877 138 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 TPMTP51580 245 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 NAP1L1P55209 391 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 CARD16Q5EG05 197 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 ZFYVE27Q5T4F4 411 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 SLC36A4Q6YBV0 504 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 LEKR1Q6ZMV7 388 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 Q6ZVU0 165 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 VSIG1Q86XK7 387 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF354CQ86Y25 554 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 MMAAQ8IVH4 418 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 PCDH20Q8N6Y1 951 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 OR2A12Q8NGT7 310 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 KIAA1524Q8TCG1 905 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 OR8D1Q8WZ84 308 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 LOXL4Q96JB6 756 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 SPACA7Q96KW9 195 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 DUSP15Q9H1R2 295 aaPredicted RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 GOLPH3Q9H4A6 298 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 KLHL11Q9NVR0 708 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 DDX56Q9NY93 547 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 RAB23Q9ULC3 237 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 SCML1Q9UN30 329 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 CYP8B1Q9UNU6 501 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 SMG5Q9UPR3 1016 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 FCF1Q9Y324 198 aaKnown RBP13.88□□□□□ -0.19
SSBP1-206ENST00000467681 MFHAS1Q9Y4C4 1052 aa13.88□□□□□ -0.19
SSBP1-206ENST00000467681 FARP1Q9Y4F1 1045 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms