RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 C10orf62Q5T681 223 aaPredicted RBP2.42□□□□□ -2.02
CCDC93-205ENST00000466171 FAM171A1Q5VUB5 890 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ARL6IP4Q66PJ3 421 aaKnown RBP2.42□□□□□ -2.02
CCDC93-205ENST00000466171 SRLQ86TD4 932 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 HORMAD2Q8N7B1 307 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 MIGA1Q8NAN2 632 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 POC1AQ8NBT0 407 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 VPS37AQ8NEZ2 397 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 LILRB1Q8NHL6 650 aaPredicted RBP2.42□□□□□ -2.02
CCDC93-205ENST00000466171 TMEM163Q8TC26 289 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 UHRF2Q96PU4 802 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 PKP4Q99569 1192 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 MYD88Q99836 296 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ELAC2Q9BQ52 826 aaKnown RBP2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ARL15Q9NXU5 204 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 RAB21Q9UL25 225 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 TRPC5Q9UL62 973 aaPredicted RBP2.42□□□□□ -2.02
CCDC93-205ENST00000466171 MAN2B2Q9Y2E5 1009 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 COMMD10Q9Y6G5 202 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 LOC105369274A0A096LPK9 316 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 IGLV5-52A0A0A0MRZ9 124 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 IGHV4-28A0A0C4DH34 117 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 LOC102723532A0A0G2JNH3 316 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 A0A1W2PPC4 97 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 TMEM247A6NEH6 219 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 ERI2A8K979 691 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 DHHO43323 396 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 LDB2O43679 373 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 SOX30O94993 753 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 CER1O95813 267 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 MMP3P08254 477 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 ENO3P13929 434 aaPredicted RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 PRIM2P49643 509 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 TAF6P49848 677 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 AK2P54819 239 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 RPL15P61313 204 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 RBM6P78332 1123 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 GRSF1Q12849 480 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 TRAF3Q13114 568 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 IFIT5Q13325 482 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 ZNF284Q2VY69 593 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 PLK5Q496M5 336 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 STPG1Q5TH74 334 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 VWA5B1Q5TIE3 1220 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 RETSATQ6NUM9 610 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 TMEM71Q6P5X7 295 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 C1orf228Q6PIY5 440 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 MEX3BQ6ZN04 569 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 C11orf96Q7Z7L8 435 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 TRABD2AQ86V40 505 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 FAM186BQ8IYM0 893 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 OR4N4Q8N0Y3 316 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 SAMD3Q8N6K7 520 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 CEP76Q8TAP6 659 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 MORC4Q8TE76 937 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 CCDC138Q96M89 665 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 IL17FQ96PD4 163 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 DUX3Q96PT4 197 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 ARPC5LQ9BPX5 153 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 SORBS1Q9BX66 1292 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 IL25Q9H293 177 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 HIPK3Q9H422 1215 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 CCDC134Q9H6E4 229 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 SDF2L1Q9HCN8 221 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 NLRC4Q9NPP4 1024 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 FSCN3Q9NQT6 498 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 ZDHHC7Q9NXF8 308 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 FNIP2Q9P278 1114 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 MALT1Q9UDY8 824 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 AGO1Q9UL18 857 aaKnown RBP2.41□□□□□ -2.02
CCDC93-205ENST00000466171 DTNAQ9Y4J8 743 aa2.41□□□□□ -2.02
CCDC93-205ENST00000466171 IGLV5-37A0A075B6J1 123 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 FAM234BA2RU67 622 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 C17orf102A2RUQ5 167 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 CLGNO14967 610 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 KIF1CO43896 1103 aaKnown RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 UNGP13051 313 aaPredicted RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 TSHRP16473 764 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 HOXB9P17482 250 aaPredicted RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 FOXL2P58012 376 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 RNASELQ05823 741 aaKnown RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 ARL13BQ3SXY8 428 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 C5orf22Q49AR2 442 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 TRMT1LQ7Z2T5 733 aaKnown RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 TMEM200AQ86VY9 491 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 ZDHHC23Q8IYP9 409 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 NAGSQ8N159 534 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 SPEM1Q8N4L4 309 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 TMEM217Q8N7C4 229 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 ANKRD44Q8N8A2 993 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 RNF152Q8N8N0 203 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 ENDOVQ8N8Q3 282 aaKnown RBP2.4□□□□□ -2.03
CCDC93-205ENST00000466171 GLIS1Q8NBF1 620 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 BICD1Q96G01 975 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 SLC39A13Q96H72 371 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 TXNDC15Q96J42 360 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 RIPOR3Q96MK2 946 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 IFT27Q9BW83 186 aa2.4□□□□□ -2.03
CCDC93-205ENST00000466171 ZNF700Q9H0M5 742 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms