RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ELAVL3Q14576 367 aaKnown RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 C22orf39Q6P5X5 142 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 Q6ZVU0 165 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 VSIG1Q86XK7 387 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 PGBD3Q8N328 593 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 LZTR1Q8N653 840 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 ATP11CQ8NB49 1132 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 PRCCQ92733 491 aaPredicted RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 SIPA1Q96FS4 1042 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 CELF6Q96J87 481 aaKnown RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 CEP44Q9C0F1 390 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 SLC39A8Q9C0K1 460 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 GOLPH3Q9H4A6 298 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 PDFQ9HBH1 243 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 KLHL11Q9NVR0 708 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 MFHAS1Q9Y4C4 1052 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 HYOU1Q9Y4L1 999 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 ACTL7AQ9Y615 435 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 ADGRG1Q9Y653 693 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 GPR179Q6PRD1 2367 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 A0A0U1RQJ8 604 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 C3orf70A6NLC5 250 aaPredicted RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 ZNF217O75362 1048 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 PLA2G5P39877 138 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 ZBTB16Q05516 673 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 SIM2Q14190 667 aaPredicted RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 ZNF776Q68DI1 518 aaPredicted RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 TMCO3Q6UWJ1 677 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 KIAA1324Q6UXG2 1013 aaKnown RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 KIAA1328Q86T90 577 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 C11orf74Q86VG3 221 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 TXLNBQ8N3L3 684 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 KCTD6Q8NC69 237 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 PCDH19Q8TAB3 1148 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 RLN3Q8WXF3 142 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 RAPGEF5Q92565 580 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 NKD2Q969F2 451 aaPredicted RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 ZC3H10Q96K80 434 aaKnown RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 CD93Q9NPY3 652 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 ITM2CQ9NQX7 267 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 MBD1Q9UIS9 605 aaPredicted RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 HPCAL4Q9UM19 191 aa20.74■□□□□ 0.91
SKA3-205ENST00000465471 SMG5Q9UPR3 1016 aaKnown RBP20.74■□□□□ 0.91
SKA3-205ENST00000465471 OTOGLQ3ZCN5 2332 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 IGHV1OR15-9A0A0B4J2B8 117 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 ALOX15BO15296 676 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 BUB1O43683 1085 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 SPOPO43791 374 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 BCKDHBP21953 392 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 KDELR1P24390 212 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 BYSLQ13895 437 aaKnown RBP20.73■□□□□ 0.91
SKA3-205ENST00000465471 ANKRD20A8PQ5CZ79 823 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 MAP7D3Q8IWC1 876 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 STK40Q8N2I9 435 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 PCDH20Q8N6Y1 951 aaKnown RBP20.73■□□□□ 0.91
SKA3-205ENST00000465471 FRMD1Q8N878 549 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 LRRC57Q8N9N7 239 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 OR2A12Q8NGT7 310 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 CASKIN2Q8WXE0 1202 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 ISG20Q96AZ6 181 aaKnown RBP20.73■□□□□ 0.91
SKA3-205ENST00000465471 SPACA7Q96KW9 195 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 CALN1Q9BXU9 219 aa20.73■□□□□ 0.91
SKA3-205ENST00000465471 PRR23AA6NEV1 266 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 ARHGAP42A6NI28 874 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 MCF2LO15068 1137 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 PRAMEF11O60813 436 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 LMNAP02545 664 aaKnown RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 PAPOLAP51003 745 aaKnown RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 TPMTP51580 245 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 KIF5AQ12840 1032 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 PLK5Q496M5 336 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 ACCSLQ4AC99 568 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 INO80DQ53TQ3 878 aaPredicted RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 KBTBD6Q86V97 674 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 TP53INP2Q8IXH6 220 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 FAM160A2Q8N612 972 aaPredicted RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 PQLC3Q8N755 202 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 PDLIM2Q96JY6 352 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 DUSP15Q9H1R2 295 aaPredicted RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 DDX56Q9NY93 547 aaKnown RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 TRIM10Q9UDY6 481 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 SCML1Q9UN30 329 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 INVSQ9Y283 1065 aa20.72■□□□□ 0.91
SKA3-205ENST00000465471 FCF1Q9Y324 198 aaKnown RBP20.72■□□□□ 0.91
SKA3-205ENST00000465471 TNRC6BQ9UPQ9 1833 aaKnown RBP20.71■□□□□ 0.91
SKA3-205ENST00000465471 ABCA7Q8IZY2 2146 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 LRRD1A4D1F6 860 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 SERPINB6P35237 376 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 PAFAH1B3Q15102 231 aaKnown RBP20.71■□□□□ 0.91
SKA3-205ENST00000465471 CST6Q15828 149 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 PMS2CLQ68D20 193 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 NCBP2-AS2Q69YL0 99 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 CEP68Q76N32 757 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 DAAM2Q86T65 1068 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 CACUL1Q86Y37 369 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 PLPP6Q8IY26 295 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 NETO2Q8NC67 525 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 OR8D1Q8WZ84 308 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms