RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 SMYD2Q9NRG4 433 aa14.84□□□□□ -0.03
COL5A1-205ENST00000464187 HBS1LQ9Y450 684 aaKnown RBP14.84□□□□□ -0.03
COL5A1-205ENST00000464187 NUP205Q92621 2012 aa14.84□□□□□ -0.03
COL5A1-205ENST00000464187 F5H423 210 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-205ENST00000464187 RNF103O00237 685 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 TRDMT1O14717 391 aaKnown RBP14.83□□□□□ -0.04
COL5A1-205ENST00000464187 C1RP00736 705 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 ALADP13716 330 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 EPCAMP16422 314 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 KCNQ1P51787 676 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 MS4A13Q5J8X5 152 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 PIK3R6Q5UE93 754 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 TTC39BQ5VTQ0 682 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-205ENST00000464187 RWDD4Q6NW29 188 aaKnown RBP14.83□□□□□ -0.04
COL5A1-205ENST00000464187 GAREM2Q75VX8 874 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 RTL10Q7L3V2 364 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 CTAGE3PQ8IX95 158 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 HS6ST3Q8IZP7 471 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 ATP6V0D2Q8N8Y2 350 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 ZNF75CPQ92670 426 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-205ENST00000464187 APOPT1Q96IL0 206 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 EBNA1BP2Q99848 306 aaKnown RBP14.83□□□□□ -0.04
COL5A1-205ENST00000464187 LRRC3Q9BY71 257 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 ZNF180Q9UJW8 692 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 NEU3Q9UQ49 428 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 GBF1Q92538 1859 aa14.83□□□□□ -0.04
COL5A1-205ENST00000464187 COG7P83436 770 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 AP1B1Q10567 949 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 MANEALQ5VSG8 457 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 TRMT10BQ6PF06 316 aaKnown RBP14.82□□□□□ -0.04
COL5A1-205ENST00000464187 LRRC6Q86X45 466 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 CCDC63Q8NA47 563 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 P2RY11Q96G91 374 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 CORO1BQ9BR76 489 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 TRPC7Q9HCX4 862 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 KLHL14Q9P2G3 628 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 HCFC2Q9Y5Z7 792 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 MAD1L1Q9Y6D9 718 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 TRIM49D1C9J1S8 452 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 E9PAM4 449 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 UGT1A9O60656 530 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 OPHN1O60890 802 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 PYGBP11216 843 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 HOXC13P31276 330 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 HNRNPH1P31943 449 aaKnown RBP14.82□□□□□ -0.04
COL5A1-205ENST00000464187 HTR7P34969 479 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 NRG1Q02297 640 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-205ENST00000464187 WASHC5Q12768 1159 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 PDK1Q15118 436 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 SEPT7Q16181 437 aaKnown RBP14.82□□□□□ -0.04
COL5A1-205ENST00000464187 ARTNQ5T4W7 220 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 TXNDC8Q6A555 127 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 ADGRD2Q7Z7M1 963 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 C14orf80Q86SX3 495 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 TP53INP2Q8IXH6 220 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 FITM2Q8N6M3 262 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 GSDMBQ8TAX9 411 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 GDPD5Q8WTR4 605 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 TBC1D31Q96DN5 1066 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 THOC1Q96FV9 657 aaKnown RBP14.82□□□□□ -0.04
COL5A1-205ENST00000464187 CYP2S1Q96SQ9 504 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 CEP41Q9BYV8 373 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 PRDM12Q9H4Q4 367 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 UGT1A7Q9HAW7 530 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 UGT1A10Q9HAW8 530 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 UGT1A8Q9HAW9 530 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 ASAH2Q9NR71 780 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 GKN1Q9NS71 199 aa14.82□□□□□ -0.04
COL5A1-205ENST00000464187 A0A1W2PRU2 124 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 EPOPA6NHQ4 379 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 PPP1R12AO14974 1030 aaPredicted RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 STK10O94804 968 aaKnown RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 DHRS4L1P0CG22 281 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 BMP8BP34820 402 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 HARS2P49590 506 aaKnown RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 NCALDP61601 193 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 CYP4F8P98187 520 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 CDK16Q00536 496 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 MTA1Q13330 715 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 RAP1GAP2Q684P5 730 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 OTOAQ7RTW8 1153 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 TDHQ8IZJ6 230 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 ARL14EPQ8N8R7 260 aaPredicted RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 MRPS31Q92665 395 aaKnown RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 SLC22A12Q96S37 553 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 ATXN3LQ9H3M9 355 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 EIF2B3Q9NR50 452 aaKnown RBP14.81□□□□□ -0.04
COL5A1-205ENST00000464187 HCFC1R1Q9NWW0 138 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 SEPT10Q9P0V9 454 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 VANGL2Q9ULK5 521 aa14.81□□□□□ -0.04
COL5A1-205ENST00000464187 WDR91A4D1P6 747 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 FGF10O15520 208 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 SNRPAP09012 282 aaKnown RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 MBL2P11226 248 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-205ENST00000464187 MYL4P12829 197 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 MLNP12872 115 aa14.8□□□□□ -0.04
COL5A1-205ENST00000464187 HDCP19113 662 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms