RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 USP53Q70EK8 1073 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 MAMDC2Q7Z304 686 aaPredicted RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 RD3Q7Z3Z2 195 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 TRMT11Q7Z4G4 463 aaKnown RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 PTRH1Q86Y79 214 aaKnown RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 C9orf106Q8NAJ2 232 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 RNF149Q8NC42 400 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 BEST2Q8NFU1 509 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 ZNF564Q8TBZ8 553 aaPredicted RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 PIGOQ8TEQ8 1089 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 PSPC1Q8WXF1 523 aaKnown RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 SGF29Q96ES7 293 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 VCPIP1Q96JH7 1222 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 CNDP2Q96KP4 475 aaKnown RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 CCNL2Q96S94 520 aaPredicted RBP3.08□□□□□ -1.92
CD46-210ENST00000462968 KCNJ15Q99712 375 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 SPZ1Q9BXG8 430 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 GPR87Q9BY21 358 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 KRT23Q9C075 422 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 POLR1BQ9H9Y6 1135 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 ASCL3Q9NQ33 180 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 ARHGAP28Q9P2N2 729 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 Q9UFV3 132 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 ANAPC2Q9UJX6 822 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 PCDH15Q96QU1 1955 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 FLNCQ14315 2725 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 CSMD1Q96PZ7 3565 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 LRBAP50851 2863 aa3.08□□□□□ -1.92
CD46-210ENST00000462968 BSNQ9UPA5 3926 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ATG2BQ96BY7 2078 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ARHGEF17Q96PE2 2063 aaPredicted RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 SPAG17Q6Q759 2223 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 AHCTF1Q8WYP5 2266 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ABCA2Q9BZC7 2435 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 SPENQ96T58 3664 aaKnown RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 A0A1W2PQF6 199 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 A0A1W2PRX2 142 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 A1L4Q6 167 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 TMEM150BA6NC51 233 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 WIPF3A6NGB9 483 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 FAM90A27PA6NNH2 459 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 LAD1O00515 517 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 KCNK3O14649 394 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 TBX3O15119 743 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 USP12O75317 370 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 STBD1O95210 358 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 KAT7O95251 611 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 NPTXRO95502 500 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 NFATC1O95644 943 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 DDAH2O95865 285 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ABHD16AO95870 558 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 MT-CO3P00414 261 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 APODP05090 189 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 CKMT2P17540 419 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ARF4P18085 180 aaPredicted RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 RBMS1P29558 406 aaKnown RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 EIF2DP41214 584 aaKnown RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 GRIA2P42262 883 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 CSNK1EP49674 416 aaKnown RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 JAK3P52333 1124 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 PTENP60484 403 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 E2F1Q01094 437 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 CD83Q01151 205 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 POU5F1BQ06416 359 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ST3GAL1Q11201 340 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 GPR17Q13304 367 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 VEPH1Q14D04 833 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 UGCGQ16739 394 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ZSCAN23Q3MJ62 389 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 DCAF12L1Q5VU92 463 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 KANSL1Q7Z3B3 1105 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 CATIPQ7Z7H3 387 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 EFCAB13Q8IY85 973 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 MMP21Q8N119 569 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 MAB21L3Q8N8X9 362 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 BEND2Q8NDZ0 799 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 NSUN7Q8NE18 718 aaKnown RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 APPL2Q8NEU8 664 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 TCP11Q8WWU5 503 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 MIB2Q96AX9 1013 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ACAP3Q96P50 834 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 PNKPQ96T60 521 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 SH2D3AQ9BRG2 576 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 LZTS2Q9BRK4 669 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 BTBD2Q9BX70 525 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 GPR174Q9BXC1 333 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ANO3Q9BYT9 981 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ADNPQ9H2P0 1102 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 WSB2Q9NYS7 404 aaPredicted RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 HSFX1Q9UBD0 423 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 PLAAQ9Y263 795 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ANKRD6Q9Y2G4 727 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 PCDHB1Q9Y5F3 818 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 TTC41PQ6P2S7 1318 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 KIF26AQ9ULI4 1882 aaPredicted RBP3.07□□□□□ -1.92
CD46-210ENST00000462968 KAT6AQ92794 2004 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 NOTCH4Q99466 2003 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 ABCA7Q8IZY2 2146 aa3.07□□□□□ -1.92
CD46-210ENST00000462968 SETD2Q9BYW2 2564 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms