RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 COL9A1P20849 921 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 SERPINH1P50454 418 aaKnown RBP12.04□□□□□ -0.48
CPNE1-221ENST00000462352 DYNLT1P63172 113 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 GBE1Q04446 702 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 SLC20A2Q08357 652 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ZNF211Q13398 564 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-221ENST00000462352 TFDP2Q14188 446 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 RPS6KA1Q15418 735 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 DLG2Q15700 870 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 HNRNPA1L2Q32P51 320 aaKnown RBP12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ZNF569Q5MCW4 686 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 DCAF12L1Q5VU92 463 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 AADACL2Q6P093 401 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 TMEM92Q6UXU6 159 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 LEKR1Q6ZMV7 388 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ARHGAP36Q6ZRI8 547 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 C1orf210Q8IVY1 113 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 SH2D3CQ8N5H7 860 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ATP11CQ8NB49 1132 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ERLEC1Q96DZ1 483 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 TLR10Q9BXR5 811 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 MTG2Q9H4K7 406 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 DTLQ9NZJ0 730 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 IPO11Q9UI26 975 aaKnown RBP12.04□□□□□ -0.48
CPNE1-221ENST00000462352 SLC8A2Q9UPR5 921 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 K7ERQ8 282 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 SMAD6O43541 496 aaKnown RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 PRAMEF11O60813 436 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 PAPSS2O95340 614 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 MAP3K6O95382 1288 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 PTPN7P35236 360 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 CETN2P41208 172 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 CLCN6P51797 869 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 DGKEP52429 567 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 GEMIN4P57678 1058 aaKnown RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 GALNT2Q10471 571 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 SLC10A2Q12908 348 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 STARD3Q14849 445 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 ACCSLQ4AC99 568 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 KIAA1211LQ6NV74 962 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 MAML2Q8IZL2 1156 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 SLC35F6Q8N357 371 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 ATPAF2Q8N5M1 289 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 FRS2Q8WU20 508 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 HERPUD2Q9BSE4 406 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 OSBPL8Q9BZF1 889 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 SP110Q9HB58 689 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 PDFQ9HBH1 243 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 CD248Q9HCU0 757 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 PRMT8Q9NR22 394 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 KCND1Q9NSA2 647 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 SUN2Q9UH99 717 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
CPNE1-221ENST00000462352 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 HEY1Q9Y5J3 304 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 NUP205Q92621 2012 aa12.03□□□□□ -0.48
CPNE1-221ENST00000462352 NYNRINQ9P2P1 1898 aaKnown RBP12.02□□□□□ -0.48
CPNE1-221ENST00000462352 EDDM13A0A1B0GTR0 161 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 TARSL2A2RTX5 802 aaKnown RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 K7ESF4 209 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 ENC1O14682 589 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 SYNCRIPO60506 623 aaKnown RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 MAFKO60675 156 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 VAV1P15498 845 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 MX2P20592 715 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 TGM2P21980 687 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 GARSP41250 739 aaKnown RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 NUBP1P53384 320 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 IL10RBQ08334 325 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 CAMK2GQ13555 558 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 HS1BP3Q53T59 392 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 INO80DQ53TQ3 878 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 C22orf39Q6P5X5 142 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 TSSK4Q6SA08 328 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 BBS12Q6ZW61 710 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 LRRC49Q8IUZ0 686 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 C17orf53Q8N3J3 647 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 TSTD1Q8NFU3 115 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 CASKIN2Q8WXE0 1202 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 PTPRN2Q92932 1015 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 HHIPQ96QV1 700 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 CEP44Q9C0F1 390 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 CARD9Q9H257 536 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 PRSS16Q9NQE7 514 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 SAE1Q9UBE0 346 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 UBA2Q9UBT2 640 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-221ENST00000462352 ZNF318Q5VUA4 2279 aa12.02□□□□□ -0.49
CPNE1-221ENST00000462352 KCNK3O14649 394 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 SIN3BO75182 1162 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 ZNF821O75541 412 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-221ENST00000462352 TMCC1O94876 653 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 TDGF1P13385 188 aa12.01□□□□□ -0.49
CPNE1-221ENST00000462352 PECAM1P16284 738 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms