RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 RSPH9Q9H1X1 276 aaPredicted RBP18.88■□□□□ 0.61
COL9A2-205ENST00000461118 RETREG1Q9H6L5 497 aa18.88■□□□□ 0.61
COL9A2-205ENST00000461118 EIF2B4Q9UI10 523 aaKnown RBP18.88■□□□□ 0.61
COL9A2-205ENST00000461118 BZW2Q9Y6E2 419 aaKnown RBP18.88■□□□□ 0.61
COL9A2-205ENST00000461118 TTC34A8MYJ7 566 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 DDX3XO00571 662 aaKnown RBP eCLIP18.87■□□□□ 0.612e-6■■■□□ 18.6
COL9A2-205ENST00000461118 ATXN1LP0C7T5 689 aaKnown RBP18.87■□□□□ 0.61
COL9A2-205ENST00000461118 ACADMP11310 421 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 NNMTP40261 264 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 RPS14P62263 151 aaKnown RBP18.87■□□□□ 0.61
COL9A2-205ENST00000461118 RPL7AP62424 266 aaKnown RBP18.87■□□□□ 0.61
COL9A2-205ENST00000461118 ZBED6P86452 979 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 C9orf64Q5T6V5 341 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 RNF219Q5W0B1 726 aaPredicted RBP18.87■□□□□ 0.61
COL9A2-205ENST00000461118 HGSNATQ68CP4 663 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 PLEKHA7Q6IQ23 1121 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 MARCH9Q86YJ5 346 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 SETD7Q8WTS6 366 aaKnown RBP18.87■□□□□ 0.61
COL9A2-205ENST00000461118 RPL10LQ96L21 214 aaKnown RBP18.87■□□□□ 0.61
COL9A2-205ENST00000461118 CNPY3Q9BT09 278 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 TSPY26PQ9H489 355 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 PARVAQ9NVD7 372 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 MPP6Q9NZW5 540 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 DKK4Q9UBT3 224 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 ZNF212Q9UDV6 495 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 OR12D3Q9UGF7 316 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 BTBD3Q9Y2F9 522 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 RAXQ9Y2V3 346 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 PCDHGB2Q9Y5G2 931 aa18.87■□□□□ 0.61
COL9A2-205ENST00000461118 SHROOM3Q8TF72 1996 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 NYNRINQ9P2P1 1898 aaKnown RBP18.86■□□□□ 0.61
COL9A2-205ENST00000461118 EDDM13A0A1B0GTR0 161 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 TMCO5BA8MYB1 307 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 SRGAP2O75044 1071 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 SIN3BO75182 1162 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 RTN2O75298 545 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 FTLP02792 175 aaPredicted RBP18.86■□□□□ 0.61
COL9A2-205ENST00000461118 TPM3P06753 285 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 SKILP12757 684 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 MAMLD1Q13495 774 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 CAMK2BQ13554 666 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 NFKBIBQ15653 356 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 MANEALQ5VSG8 457 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 DCUN1D2Q6PH85 259 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 PTPRN2Q92932 1015 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 MCEEQ96PE7 176 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 ZYG11BQ9C0D3 744 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 XPO4Q9C0E2 1151 aaKnown RBP18.86■□□□□ 0.61
COL9A2-205ENST00000461118 ISCUQ9H1K1 167 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 MTG2Q9H4K7 406 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 VPS28Q9UK41 221 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 SCML1Q9UN30 329 aa18.86■□□□□ 0.61
COL9A2-205ENST00000461118 LUC7L2Q9Y383 392 aaKnown RBP18.86■□□□□ 0.61
COL9A2-205ENST00000461118 A0A1B0GVT2 93 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 ILVBLA1L0T0 632 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 CCP110O43303 1012 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 CER1O95813 267 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 DNTTP04053 509 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 RHOCP08134 193 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 OR1E1P30953 314 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 STK19P49842 368 aaPredicted RBP18.85■□□□□ 0.61
COL9A2-205ENST00000461118 C6orf118Q5T5N4 469 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 ZNF776Q68DI1 518 aaPredicted RBP18.85■□□□□ 0.61
COL9A2-205ENST00000461118 ZNF783Q6ZMS7 281 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 FRS2Q8WU20 508 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 HNRNPLLQ8WVV9 542 aaKnown RBP18.85■□□□□ 0.61
COL9A2-205ENST00000461118 FAM129BQ96TA1 746 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 MUC3BQ9H195 1237 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 PCED1AQ9H1Q7 454 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 SCUBE2Q9NQ36 999 aa18.85■□□□□ 0.61
COL9A2-205ENST00000461118 COL5A1P20908 1838 aaPredicted RBP18.85■□□□□ 0.61
COL9A2-205ENST00000461118 MYLKQ15746 1914 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 FLRT2O43155 660 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 ATP9BO43861 1147 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 RNASEH1O60930 286 aaKnown RBP18.84■□□□□ 0.61
COL9A2-205ENST00000461118 GYPCP04921 128 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 SERPING1P05155 500 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 ACSL1P33121 698 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 CSNK1EP49674 416 aaKnown RBP18.84■□□□□ 0.61
COL9A2-205ENST00000461118 AIF1P55008 147 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 KRT83P78385 493 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 IL27RAQ6UWB1 636 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 TFAP2DQ7Z6R9 452 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 SLFN11Q7Z7L1 901 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 CACUL1Q86Y37 369 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 CCDC185Q8N715 623 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 PSMB7Q99436 277 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 C2orf49Q9BVC5 232 aaPredicted RBP18.84■□□□□ 0.61
COL9A2-205ENST00000461118 C6orf106Q9H6K1 298 aaPredicted RBP18.84■□□□□ 0.61
COL9A2-205ENST00000461118 SLC25A13Q9UJS0 675 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 HS3ST2Q9Y278 367 aa18.84■□□□□ 0.61
COL9A2-205ENST00000461118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL9A2-205ENST00000461118 TMEM191CA6NGB0 347 aa18.83■□□□□ 0.6
COL9A2-205ENST00000461118 FAM72CH0Y354 149 aa18.83■□□□□ 0.6
COL9A2-205ENST00000461118 CBFA2T2O43439 604 aa18.83■□□□□ 0.6
COL9A2-205ENST00000461118 PLEKP08567 350 aaPredicted RBP18.83■□□□□ 0.6
COL9A2-205ENST00000461118 RHOQP17081 205 aa18.83■□□□□ 0.6
COL9A2-205ENST00000461118 DESP17661 470 aa18.83■□□□□ 0.6
COL9A2-205ENST00000461118 OGDHQ02218 1023 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms