RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 KDF1Q8NAX2 398 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 SLC20A1Q8WUM9 679 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 RXFP2Q8WXD0 754 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ADAMTS14Q8WXS8 1223 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PPP1R16AQ96I34 528 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PCMTD1Q96MG8 357 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CFAP57Q96MR6 1250 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PSMB7Q99436 277 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 EIF3CQ99613 913 aaKnown RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 HDAC8Q9BY41 377 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 EDEM3Q9BZQ6 932 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 MAGEH1Q9H213 219 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 HSD3B7Q9H2F3 369 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 MTG2Q9H4K7 406 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ANLNQ9NQW6 1124 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ADAM22Q9P0K1 906 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 OR12D3Q9UGF7 316 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 VPS51Q9UID3 782 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 FRYQ5TBA9 3013 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 A0A1W2PQC6 194 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 ZSCAN5CA6NGD5 496 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 EPHB6O15197 1021 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 SH3BP5O60239 455 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 ZMPSTE24O75844 475 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 DKK1O94907 266 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 RHOQP17081 205 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 CD38P28907 300 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 RECQLP46063 649 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 IRAK1P51617 712 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 GNA12Q03113 381 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 FOXC1Q12948 553 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 CCDC14Q49A88 953 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 ACCSLQ4AC99 568 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 FILIP1LQ4L180 1135 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 SETMARQ53H47 684 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 TRNP1Q6NT89 227 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 MON1BQ7L1V2 547 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 ADAT2Q7Z6V5 191 aaKnown RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 ATP11CQ8NB49 1132 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 OR52K2Q8NGK3 314 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 OR2A12Q8NGT7 310 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 OR14C36Q8NHC7 312 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 PIP4K2CQ8TBX8 421 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 CASKIN2Q8WXE0 1202 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 AGPAT1Q99943 283 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 NCAPGQ9BPX3 1015 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 C11orf70Q9BRQ4 267 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 SELENOOQ9BVL4 669 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 FSCN3Q9NQT6 498 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 TMEM248Q9NWD8 314 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 FNDC3AQ9Y2H6 1198 aaKnown RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 SNX11Q9Y5W9 270 aa10.24□□□□□ -0.77
HDLBP-228ENST00000459788 TDRD6O60522 2096 aaKnown RBP10.24□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3DA0A087WVF3 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3IA0A087WXS9 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3EA0A087X179 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3KA0A087X1G2 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 A0A1B0GTQ1 180 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 A0A1W2PR77 199 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TCRBV5S1A1TA0A578 114 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3FA6NER0 549 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3LB9A6J9 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 PRAMEF26H0Y7S4 382 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3HP0C7X1 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 GZMAP12544 262 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 PTMSP20962 102 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 GPD1P21695 349 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 L1CAMP32004 1257 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 CHRNA3P32297 505 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 RXRGP48443 463 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 ARRB1P49407 418 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 KLK7P49862 253 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 SERPINH1P50454 418 aaKnown RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 ZNF135P52742 658 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 ZNF143P52747 638 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 CNTN1Q12860 1018 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 AGBL4Q5VU57 503 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3GQ6DHY5 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3CQ6IPX1 549 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 C22orf39Q6P5X5 142 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 UNQ6494/PRO21346Q6UXR6 183 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 Q6ZVU0 165 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 NLRP14Q86W24 1093 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 FAM131BQ86XD5 332 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D3Q8IZP1 549 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 OR2I1PQ8NGU4 316 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 TBC1D31Q96DN5 1066 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 IQCDQ96DY2 449 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 PCDHB18PQ96TA0 734 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 ELF4Q99607 663 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-228ENST00000459788 CNPY3Q9BT09 278 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 SCNM1Q9BWG6 230 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 ATP13A1Q9HD20 1204 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 DYRK4Q9NR20 520 aa10.23□□□□□ -0.77
HDLBP-228ENST00000459788 GDF3Q9NR23 364 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms