RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	USP36	Q9P275	1121 aa	Known RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	SLC25A13	Q9UJS0	675 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	SARDH	Q9UL12	918 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	CACNA1A	O00555	2505 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	EDDM13	A0A1B0GTR0	161 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	TARSL2	A2RTX5	802 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PLK4	O00444	970 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ARHGAP6	O43182	974 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	MFSD11	O43934	449 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	SYNCRIP	O60506	623 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PRAMEF11	O60813	436 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	RPP40	O75818	363 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ALDH1A2	O94788	518 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	MAP3K6	O95382	1288 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PEX11B	O96011	259 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	KRT1	P04264	644 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	TNNT1	P13805	278 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	KDELR1	P24390	212 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ARL4A	P40617	200 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PAPOLA	P51003	745 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	TPMT	P51580	245 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ZNF135	P52742	658 aa	Predicted RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	NDST2	P52849	883 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	KRT83	P78385	493 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ADCY2	Q08462	1091 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	SLC10A2	Q12908	348 aa	Predicted RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	KRT81	Q14533	505 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	TAZ	Q16635	292 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PARP15	Q460N3	678 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PLK5	Q496M5	336 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ANKRD20A8P	Q5CZ79	823 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	FAM182A	Q5T1J6	154 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	LRRC38	Q5VT99	294 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	MFSD7	Q6UXD7	560 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	KIAA1328	Q86T90	577 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	METTL3	Q86U44	580 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	MMAA	Q8IVH4	418 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PGBD3	Q8N328	593 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	AADAT	Q8N5Z0	425 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ATP11C	Q8NB49	1132 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	LRRN4	Q8WUT4	740 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	SIPA1	Q96FS4	1042 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	NSMCE3	Q96MG7	304 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	ZNF670	Q9BS34	389 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	HERPUD2	Q9BSE4	406 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	CALN1	Q9BXU9	219 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	PRDM16	Q9HAZ2	1276 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	LHX3	Q9UBR4	397 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	SUN2	Q9UH99	717 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	LCMT1	Q9UIC8	334 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	CYP8B1	Q9UNU6	501 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	SMG5	Q9UPR3	1016 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	CAPN6	Q9Y6Q1	641 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	WASF2	Q9Y6W5	498 aa		10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.47	□□□□□ -0.73
MRPL55-223	ENST00000459783	MACROD2	A1Z1Q3	448 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	LRRD1	A4D1F6	860 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	PRR23A	A6NEV1	266 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	GOLGA6L6	A8MZA4	724 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	C10orf142	B7Z368	130 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	MUSK	O15146	869 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	DAPK3	O43293	454 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	SPOP	O43791	374 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	GJB3	O75712	270 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	TMCC1	O94876	653 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	IGLV3-19	P01714	112 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	KRT7	P08729	469 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	GK	P32189	559 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	DRD3	P35462	400 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	SLC1A1	P43005	524 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	RGR	P47804	291 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	GBE1	Q04446	702 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	SIM2	Q14190	667 aa	Predicted RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	PAFAH1B3	Q15102	231 aa	Known RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	PDK2	Q15119	407 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	LLGL1	Q15334	1064 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	CYTH1	Q15438	398 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	ACCSL	Q4AC99	568 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	RETSAT	Q6NUM9	610 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	ZC3H14	Q6PJT7	736 aa	Known RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	DPY19L3	Q6ZPD9	716 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	RHOT1	Q8IXI2	618 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	PLD5	Q8N7P1	536 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	KCTD6	Q8NC69	237 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	ALG3	Q92685	438 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	RNF25	Q96BH1	459 aa	Predicted RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	ZNF830	Q96NB3	372 aa	Predicted RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	RNF157	Q96PX1	679 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	PPP1R9B	Q96SB3	815 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	TM6SF2	Q9BZW4	377 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	IRF2BPL	Q9H1B7	796 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	LUC7L	Q9NQ29	371 aa	Known RBP	10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	ITM2C	Q9NQX7	267 aa		10.46	□□□□□ -0.73
MRPL55-223	ENST00000459783	CXorf51A	A0A1B0GTR3	108 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZNF487	B1APH4	448 aa		10.45	□□□□□ -0.74
MRPL55-223	ENST00000459783	DFFA	O00273	331 aa		10.45	□□□□□ -0.74

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