RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PEBP4Q96S96 227 aa19.11■□□□□ 0.65
USP39-209ENST00000458268 ZWILCHQ9H900 591 aa19.11■□□□□ 0.65
USP39-209ENST00000458268 TMEM248Q9NWD8 314 aa19.11■□□□□ 0.65
USP39-209ENST00000458268 ZNF212Q9UDV6 495 aa19.11■□□□□ 0.65
USP39-209ENST00000458268 ANAPC7Q9UJX3 599 aa19.11■□□□□ 0.65
USP39-209ENST00000458268 FCF1Q9Y324 198 aaKnown RBP19.11■□□□□ 0.65
USP39-209ENST00000458268 FARP1Q9Y4F1 1045 aaPredicted RBP19.11■□□□□ 0.65
USP39-209ENST00000458268 EEF2KO00418 725 aaKnown RBP19.1■□□□□ 0.65
USP39-209ENST00000458268 AKR1B10O60218 316 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 MIPP30301 263 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 L1CAMP32004 1257 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 DPP6P42658 865 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 SFSWAPQ12872 951 aaKnown RBP19.1■□□□□ 0.65
USP39-209ENST00000458268 PUM1Q14671 1186 aaKnown RBP eCLIP19.1■□□□□ 0.65
USP39-209ENST00000458268 ARID5BQ14865 1188 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 POLD3Q15054 466 aaPredicted RBP19.1■□□□□ 0.65
USP39-209ENST00000458268 DUOXA1Q1HG43 343 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 SMTNL2Q2TAL5 461 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 ARTNQ5T4W7 220 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 STPG1Q5TH74 334 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.1■□□□□ 0.65
USP39-209ENST00000458268 DGLUCYQ7Z3D6 616 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 NLRP14Q86W24 1093 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 OR14C36Q8NHC7 312 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 PIP4K2CQ8TBX8 421 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 HSPH1Q92598 858 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 ZNF419Q96HQ0 510 aaPredicted RBP19.1■□□□□ 0.65
USP39-209ENST00000458268 NEUROG2Q9H2A3 272 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 CATSPERBQ9H7T0 1116 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 ABHD10Q9NUJ1 306 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 HPCAL4Q9UM19 191 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 NEU3Q9UQ49 428 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 HS3ST2Q9Y278 367 aa19.1■□□□□ 0.65
USP39-209ENST00000458268 C4orf47A7E2U8 309 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 C1QTNF3-AMACRE9PGA6 284 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 KPNA3O00505 521 aaPredicted RBP19.09■□□□□ 0.65
USP39-209ENST00000458268 MFAP3LO75121 409 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 IGLV3-19P01714 112 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 GNSP15586 552 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 SDHBP21912 280 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 ETFBP38117 255 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 GALCP54803 685 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 ARF5P84085 180 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 ERMARDQ5T6L9 678 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 ZNF783Q6ZMS7 281 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 AADATQ8N5Z0 425 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 ARFGAP1Q8N6T3 406 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 NETO2Q8NC67 525 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 CHST14Q8NCH0 376 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 OR2I1PQ8NGU4 316 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 ARHGEF2Q92974 986 aaKnown RBP19.09■□□□□ 0.65
USP39-209ENST00000458268 KCTD15Q96SI1 283 aaPredicted RBP19.09■□□□□ 0.65
USP39-209ENST00000458268 PACSIN1Q9BY11 444 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 TM6SF2Q9BZW4 377 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 RBSNQ9H1K0 784 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 SGK2Q9HBY8 427 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 CTTNBP2NLQ9P2B4 639 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 SARDHQ9UL12 918 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 SCML1Q9UN30 329 aa19.09■□□□□ 0.65
USP39-209ENST00000458268 TMEM110-MUSTN1A8MSY1 372 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 METTL12A8MUP2 240 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 BUB1O43683 1085 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 LRCH4O75427 683 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 ENGP17813 658 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 C5AR1P21730 350 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 SERPINH1P50454 418 aaKnown RBP19.08■□□□□ 0.64
USP39-209ENST00000458268 AIF1P55008 147 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 KCNT1Q5JUK3 1230 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 FAM46CQ5VWP2 391 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 NCEH1Q6PIU2 408 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 USP30Q70CQ3 517 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 RTL3Q8N8U3 475 aaKnown RBP19.08■□□□□ 0.64
USP39-209ENST00000458268 CADM4Q8NFZ8 388 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 OR6K2Q8NGY2 324 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 CTNNBL1Q8WYA6 563 aaPredicted RBP19.08■□□□□ 0.64
USP39-209ENST00000458268 CELF6Q96J87 481 aaKnown RBP19.08■□□□□ 0.64
USP39-209ENST00000458268 DNAJC7Q99615 494 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 MAGEH1Q9H213 219 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 TMEM9BQ9NQ34 198 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 SPTLC3Q9NUV7 552 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 SUSD2Q9UGT4 822 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 SLC6A14Q9UN76 642 aa19.08■□□□□ 0.64
USP39-209ENST00000458268 PLXNA2O75051 1894 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3DA0A087WVF3 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3IA0A087WXS9 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3EA0A087X179 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3KA0A087X1G2 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3FA6NER0 549 aaPredicted RBP19.07■□□□□ 0.64
USP39-209ENST00000458268 LRRC72A6NJI9 287 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3LB9A6J9 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 RASA4BC9J798 803 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 AKR1B15C9JRZ8 316 aaPredicted RBP19.07■□□□□ 0.64
USP39-209ENST00000458268 SLC30A4O14863 429 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 RASA4O43374 803 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3HP0C7X1 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TCF4P15884 667 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 GOT1P17174 413 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 CHRNA3P32297 505 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3GQ6DHY5 549 aa19.07■□□□□ 0.64
USP39-209ENST00000458268 TBC1D3CQ6IPX1 549 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms