RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HTR7P34969 479 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 ACVRL1P37023 503 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 SSR1P43307 286 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 GALCP54803 685 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 GEMIN4P57678 1058 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 GFPT1Q06210 699 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 PIGHQ14442 188 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 NLRP14Q86W24 1093 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 CNGA4Q8IV77 575 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 RTL3Q8N8U3 475 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 ARHGEF2Q92974 986 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 CCDC42Q96M95 316 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 EIF3CQ99613 913 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 DNAJC7Q99615 494 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 RTKNQ9BST9 563 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 PCED1AQ9H1Q7 454 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 NEUROG2Q9H2A3 272 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 NDFIP2Q9NV92 336 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 ZNF212Q9UDV6 495 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 ANAPC7Q9UJX3 599 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 DMDP11532 3685 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 LRRC72A6NJI9 287 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 MYO1FO00160 1098 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 MCF2LO15068 1137 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 ALOX15BO15296 676 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 FGF10O15520 208 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 FSBPO95073 299 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 GOT1P17174 413 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 PPP6R3Q5H9R7 873 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 STPG1Q5TH74 334 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 SLC23A3Q6PIS1 610 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 SARM1Q6SZW1 724 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 OR14C36Q8NHC7 312 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 CTNNBL1Q8WYA6 563 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 SNRNP25Q9BV90 132 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 TNKS2Q9H2K2 1166 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 C6orf106Q9H6K1 298 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 DYRK4Q9NR20 520 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 ABHD10Q9NUJ1 306 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 CTTNBP2NLQ9P2B4 639 aa18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 EVLQ9UI08 416 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-215ENST00000456545 SSU72P8A0A1W2PR75 194 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 SMAD6O43541 496 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 BUB1O43683 1085 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 MFAP3LO75121 409 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 CYP1A2P05177 515 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 SYPP08247 313 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 SERPINF2P08697 491 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 H2AFZP0C0S5 128 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 CHRNA3P32297 505 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 SERPINH1P50454 418 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 YBEYP58557 167 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 ZNF252P-AS1Q0IIN9 211 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 CCDC15Q0P6D6 951 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 SLC18A3Q16572 532 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 BOLA3Q53S33 107 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 ARTNQ5T4W7 220 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 C22orf39Q6P5X5 142 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 H2AFVQ71UI9 128 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 DGLUCYQ7Z3D6 616 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 RYBPQ8N488 228 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 PIP4K2CQ8TBX8 421 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 GTPBP2Q9BX10 602 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 ACE2Q9BYF1 805 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 ZWILCHQ9H900 591 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 TMEM9BQ9NQ34 198 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 RXFP3Q9NSD7 469 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 EIF2B4Q9UI10 523 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 FZD4Q9ULV1 537 aa18.46■□□□□ 0.55
PDLIM2-215ENST00000456545 TBC1D3DA0A087WVF3 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3IA0A087WXS9 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3EA0A087X179 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3KA0A087X1G2 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 A0A1B0GTW7 788 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 LNP1A1A4G5 178 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3FA6NER0 549 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3LB9A6J9 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 KPNA3O00505 521 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 SLC30A4O14863 429 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 KDELR3O43731 214 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 LRCH4O75427 683 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 ZMPSTE24O75844 475 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 PRNPP04156 253 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3HP0C7X1 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 C7P10643 843 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 PCK1P35558 622 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 MAPK8P45983 427 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 ARF5P84085 180 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 POM121L1PQ3SYA9 428 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 DAB2IPQ5VWQ8 1189 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3GQ6DHY5 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3CQ6IPX1 549 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 PSTKQ8IV42 348 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 TBC1D3Q8IZP1 549 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 ARFGAP1Q8N6T3 406 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 PCDH20Q8N6Y1 951 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 DNASE2BQ8WZ79 361 aa18.45■□□□□ 0.54
PDLIM2-215ENST00000456545 HSPH1Q92598 858 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms