RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TDRPQ86YL5 185 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 UNC5BQ8IZJ1 945 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TSPEARQ8WU66 669 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ASB7Q9H672 318 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZSWIM5Q9P217 1185 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 PACSIN3Q9UKS6 424 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 VANGL2Q9ULK5 521 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SNX6Q9UNH7 406 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TECPR2O15040 1411 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 MED13LQ71F56 2210 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 USP17L3A6NCW0 530 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 USP17L4A6NCW7 530 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 H3BNH8 94 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TRMUO75648 421 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ATP1A1P05023 1023 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SUZ12Q15022 739 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 USP17L1Q7RTZ2 530 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TMC8Q8IU68 726 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PROCA1Q8NCQ7 364 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ACSS3Q9H6R3 686 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF221Q9UK13 617 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF335Q9H4Z2 1342 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PHKG2P15735 406 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 NAMPTP43490 491 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PTDSS1P48651 473 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PRKCEQ02156 737 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 NIPAL1Q6NVV3 410 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SCARA5Q6ZMJ2 495 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RYBPQ8N488 228 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ATP6V0D2Q8N8Y2 350 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FAM13CQ8NE31 585 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PLIN2Q99541 437 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SAV1Q9H4B6 383 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 EXO5Q9H790 373 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RBM12Q9NTZ6 932 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 STX16O14662 325 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 VAPBO95292 243 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PSMG1O95456 288 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HSMCR30P0CW71 290 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 DYNLT1P63172 113 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CHI3L2Q15782 390 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FBXW10Q5XX13 1052 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HEATR4Q86WZ0 1026 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CHSY1Q86X52 802 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FAM126BQ8IXS8 530 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 INO80EQ8NBZ0 244 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HIPK4Q8NE63 616 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 STAG3L4Q8TBR4 150 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PPP1R10Q96QC0 940 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CASS4Q9NQ75 786 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 NFKBIL1Q9UBC1 381 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SNX13Q9Y5W8 968 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TLL2Q9Y6L7 1015 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RNASEH1O60930 286 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 BLMHQ13867 455 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ACCSLQ4AC99 568 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SLC9A9Q8IVB4 645 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 UBE2J2Q8N2K1 259 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SGF29Q96ES7 293 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SEZ6LQ9BYH1 1024 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 MRPL39Q9NYK5 338 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 HEY2Q9UBP5 337 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PDE2AO00408 941 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PER2O15055 1255 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 EPCAMP16422 314 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GPD1P21695 349 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PTH1RQ03431 593 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FGL1Q08830 312 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PKN1Q16512 942 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CATSPER4Q7RTX7 472 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GSPT2Q8IYD1 628 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ITFG1Q8TB96 612 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GDPD5Q8WTR4 605 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZDHHC15Q96MV8 337 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SAE1Q9UBE0 346 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 TDRD15B5MCY1 1934 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CD163L1Q9NR16 1453 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FREM1Q5H8C1 2179 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FYNP06241 537 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 CYP11B1P15538 503 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 PTPN3P26045 913 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 AKR1D1P51857 326 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FOXM1Q08050 763 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ANKRD26P1Q6NSI1 321 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GADL1Q6ZQY3 521 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ASB13Q8WXK3 278 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 FRMD6Q96NE9 622 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 EHD4Q9H223 541 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 WWOXQ9NZC7 414 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 DENND3A2RUS2 1198 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 NEMP1O14524 444 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ALAS1P13196 640 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF7P17097 686 aaPredicted RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 GPR15P49685 360 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 ITGA8P53708 1063 aa5.28□□□□□ -1.56
CSMD3-204ENST00000455883 RPL10AP62906 217 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 SKIV2LQ15477 1246 aaKnown RBP5.28□□□□□ -1.56
CSMD3-204ENST00000455883 STXBP5Q5T5C0 1151 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms