RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 LINGO4Q6UY18 593 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 IRF2BP2Q7Z5L9 587 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SLFN11Q7Z7L1 901 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 NAXDQ8IW45 347 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 MCOLN2Q8IZK6 566 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 BAP1Q92560 729 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 NTAN1Q96AB6 310 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D31Q96DN5 1066 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 MCEEQ96PE7 176 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 RAB6CQ9H0N0 254 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 KDM4CQ9H3R0 1056 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 IL21RQ9HBE5 538 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 DYRK4Q9NR20 520 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 AASDHPPTQ9NRN7 309 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 TM7SF3Q9NS93 570 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SARDHQ9UL12 918 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 PPM1HQ9ULR3 514 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SNX11Q9Y5W9 270 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SLCO1B1Q9Y6L6 691 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 NYNRINQ9P2P1 1898 aaKnown RBP10.93□□□□□ -0.66
DDX39A-203ENST00000454233 PCNX2A6NKB5 2137 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 TPRP12270 2363 aaKnown RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 DOCK4Q8N1I0 1966 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 LAMA1P25391 3075 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 A0A1B0GTH6 734 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SYCE3A1L190 88 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 LRRC53A6NM62 1247 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 K7ERQ8 282 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 PLK4O00444 970 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 KPNA3O00505 521 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 VILLO15195 856 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 CCP110O43303 1012 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 DFNA5O60443 496 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 RTN2O75298 545 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 LRIG2O94898 1065 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 PRNPP04156 253 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 PLEKP08567 350 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 GLDCP23378 1020 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 CHRNA3P32297 505 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 NUDT1P36639 197 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SERPINH1P50454 418 aaKnown RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 GEMIN4P57678 1058 aaKnown RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 BNC1Q01954 994 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 CNTN1Q12860 1018 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 IQCB1Q15051 598 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 POM121L1PQ3SYA9 428 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SLC45A4Q5BKX6 768 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 EFHC2Q5JST6 749 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 MANEALQ5VSG8 457 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SFMBT2Q5VUG0 894 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 PRPF39Q86UA1 669 aaKnown RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 CCDC185Q8N715 623 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 TMIEQ8NEW7 156 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 OR2A12Q8NGT7 310 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SETD7Q8WTS6 366 aaKnown RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 VCPIP1Q96JH7 1222 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SERAC1Q96JX3 654 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 SLC6A18Q96N87 628 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 ORAI3Q9BRQ5 295 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 CNPY3Q9BT09 278 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 EDEM3Q9BZQ6 932 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 MAGEH1Q9H213 219 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 TMEM248Q9NWD8 314 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 ZNF212Q9UDV6 495 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 HPCAL4Q9UM19 191 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 FNDC3AQ9Y2H6 1198 aaKnown RBP10.92□□□□□ -0.66
DDX39A-203ENST00000454233 PCDHGB2Q9Y5G2 931 aa10.92□□□□□ -0.66
DDX39A-203ENST00000454233 CXorf51AA0A1B0GTR3 108 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 TCRBV5S1A1TA0A578 114 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 TMCO5BA8MYB1 307 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 FAM72CH0Y354 149 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 FLRT2O43155 660 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 SMAD6O43541 496 aaKnown RBP10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PLRG1O43660 514 aaKnown RBP10.91□□□□□ -0.66
DDX39A-203ENST00000454233 RAMP2O60895 175 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 ZMPSTE24O75844 475 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 TRIM16O95361 564 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 CD38P28907 300 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 L1CAMP32004 1257 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 CCT8P50990 548 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 DNA2P51530 1060 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 METAP1P53582 386 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 AIF1P55008 147 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 RPL7AP62424 266 aaKnown RBP10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PPP2CBP62714 309 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PPP2CAP67775 309 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 KLHL30Q0D2K2 578 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 SCAPQ12770 1279 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 TRIP6Q15654 476 aaKnown RBP10.91□□□□□ -0.66
DDX39A-203ENST00000454233 ZNF423Q2M1K9 1284 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 ARTNQ5T4W7 220 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 FAM72AQ5TYM5 149 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 AGBL4Q5VU57 503 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 FAM72DQ6L9T8 149 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 LAYNQ6UX15 382 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 NLRP14Q86W24 1093 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 FAM72BQ86X60 149 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 ZNF354CQ86Y25 554 aa10.91□□□□□ -0.66
DDX39A-203ENST00000454233 PCDH20Q8N6Y1 951 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms