RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 BIRC7Q96CA5 298 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 C16orf45Q96MC5 204 aaPredicted RBP18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 TKTL2Q9H0I9 626 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 THAP2Q9H0W7 228 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 GAREM1Q9H706 876 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 PIGVQ9NUD9 493 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 TFR2Q9UP52 801 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 NUMA1Q14980 2115 aa18.49■□□□□ 0.55
SQSTM1-204ENST00000453046 A0A1B0GVT2 93 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 A0A1W2PP55 124 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 GOLGA8SH3BPF8 625 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 SH3BP5O60239 455 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 CLDN11O75508 207 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 GJB3O75712 270 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 F9P00740 461 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 CYP1A2P05177 515 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 SLC8A1P32418 973 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 GABRB2P47870 512 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 PSMD8P48556 350 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 PLK1P53350 603 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 GSCP56915 257 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 ACCSLQ4AC99 568 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 BRMS1LQ5PSV4 323 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 ADAT2Q7Z6V5 191 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 STK40Q8N2I9 435 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 NPY6RQ99463 290 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 C11orf70Q9BRQ4 267 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 ADAM22Q9P0K1 906 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 SLC25A13Q9UJS0 675 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 VPS28Q9UK41 221 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 GUCA1BQ9UMX6 200 aa18.48■□□□□ 0.55
SQSTM1-204ENST00000453046 PCNX2A6NKB5 2137 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 MACROD2A1Z1Q3 448 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 LRRC72A6NJI9 287 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 MTA2O94776 668 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 ADH1BP00325 375 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 IL1BP01584 269 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 SPINK2P20155 84 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 CD27P26842 260 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 SCNN1AP37088 669 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 HADHBP55084 474 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 PTP4A2Q12974 167 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 HLA-BQ31612 363 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 C2CD6Q53TS8 623 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 KIAA0895LQ68EN5 471 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 CXorf57Q6NSI4 855 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 C14orf80Q86SX3 495 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 XYLT1Q86Y38 959 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 DNAAF5Q86Y56 855 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 NAXDQ8IW45 347 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 C1orf216Q8TAB5 229 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 PTPRN2Q92932 1015 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 ARHGEF26Q96DR7 871 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 ALS2CR12Q96Q35 445 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 FAM129BQ96TA1 746 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 TBCBQ99426 244 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 MUC3BQ9H195 1237 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 NEUROG2Q9H2A3 272 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 TM9SF3Q9HD45 589 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 TMEM51Q9NW97 253 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 ARHGEF38Q9NXL2 777 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 UVRAGQ9P2Y5 699 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 SERGEFQ9UGK8 458 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 CEP295Q9C0D2 2601 aa18.47■□□□□ 0.55
SQSTM1-204ENST00000453046 TFE3P19532 575 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 CXCR3P49682 368 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 IRAK1P51617 712 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 CDH4P55283 916 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 ETF1P62495 437 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 ELAVL3Q14576 367 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 TRIP6Q15654 476 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 SLC25A52Q3SY17 297 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 OTUD1Q5VV17 481 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 LRRC31Q6UY01 552 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 TRIM58Q8NG06 486 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 SETD7Q8WTS6 366 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 PGAP3Q96FM1 320 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 CAMK1GQ96NX5 476 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 FEM1AQ9BSK4 669 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 SCNM1Q9BWG6 230 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 IL21RQ9HBE5 538 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 OSGEPQ9NPF4 335 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 TM7SF3Q9NS93 570 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 CNOT8Q9UFF9 292 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 FZD4Q9ULV1 537 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 SLCO1B1Q9Y6L6 691 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 SCINQ9Y6U3 715 aa18.46■□□□□ 0.55
SQSTM1-204ENST00000453046 CACNA1BQ00975 2339 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 TOP3BO95985 862 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 C5AR1P21730 350 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 GRIA4P48058 902 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 FAM193AP78312 1265 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 KIF19Q2TAC6 998 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 NCEH1Q6PIU2 408 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 DSG4Q86SJ6 1040 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 C3orf20Q8ND61 904 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 OR14C36Q8NHC7 312 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 OR8D1Q8WZ84 308 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 NT5C3BQ969T7 300 aa18.45■□□□□ 0.54
SQSTM1-204ENST00000453046 ADAM33Q9BZ11 813 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms