RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 METTL6Q8TCB7 284 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 REXO5Q96IC2 774 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 PACSIN1Q9BY11 444 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 CNGB3Q9NQW8 809 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 UBIAD1Q9Y5Z9 338 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 PTCH2Q9Y6C5 1203 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 CCR4P51679 360 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 CASP7P55210 303 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 PFKPQ01813 784 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 BIKQ13323 160 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 RRP1BQ14684 758 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 POM121L1PQ3SYA9 428 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 LOC100653049A0A140TA62 436 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TLR5O60602 858 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 KRT34O76011 436 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 CDK7P50613 346 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 NME5P56597 212 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 NUP107P57740 925 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 OTOP2Q7RTS6 562 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ATG16L2Q8NAA4 619 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TPD52L3Q96J77 140 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 FERD3LQ96RJ6 166 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 POLR1BQ9H9Y6 1135 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 GGT7Q9UJ14 662 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ZMYM5Q9UJ78 669 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 CCL16O15467 120 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 SERPINI2O75830 405 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ITGAXP20702 1163 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 FAM98BQ52LJ0 330 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 C9orf57Q5W0N0 161 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 OSBPL1AQ9BXW6 950 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 KCNMB3Q9NPA1 279 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 SUCOQ9UBS9 1254 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 PHTF1Q9UMS5 762 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 APOC4-APOC2K7ER74 178 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 APOC2P02655 101 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 PCYT1AP49585 367 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 GTF2BQ00403 316 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 DUSP4Q13115 394 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 FAM45BPQ6NSW5 357 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 FAM45AQ8TCE6 357 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 SPPL2BQ8TCT7 592 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 CAAP1Q9H8G2 361 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 MID1IP1Q9NPA3 183 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.38□□□□□ -0.591e-24■■■■□ 24.1
FN1-211ENST00000443816 ARHGAP28Q9P2N2 729 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 COLEC10Q9Y6Z7 277 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 H3BM21 787 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 DAB1O75553 588 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 PSMD10O75832 226 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 FARP2O94887 1054 aaPredicted RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 VAPBO95292 243 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TRUB2O95900 331 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 SLC35G4P0C7Q5 338 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ZNF23P17027 643 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ATP4AP20648 1035 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ZC3H12AQ5D1E8 599 aaKnown RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 VGLL2Q8N8G2 317 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 ZSCAN18Q8TBC5 510 aaPredicted RBP11.38□□□□□ -0.59
FN1-211ENST00000443816 ZNF711Q9Y462 761 aa11.38□□□□□ -0.59
FN1-211ENST00000443816 TERF2Q15554 542 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 TRIM71Q2Q1W2 868 aaKnown RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 BRMS1LQ5PSV4 323 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 SPRYD7Q5W111 196 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 FOXR1Q6PIV2 292 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 CCDC81Q6ZN84 652 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 VN1R5Q7Z5H4 357 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 SCAIQ8N9R8 606 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 SEPT4O43236 478 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 AIF1P55008 147 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 DYNC1I2Q13409 638 aaKnown RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 DDR2Q16832 855 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 MPPE1Q53F39 396 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 AGKQ53H12 422 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 BNC2Q6ZN30 1099 aaPredicted RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 ARHGEF19Q8IW93 802 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 SPATA5L1Q9BVQ7 753 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 NEK6Q9HC98 313 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 ZNF638Q14966 1978 aaKnown RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 COL3A1P02461 1466 aaPredicted RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 UBDO15205 165 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 TEX28O15482 410 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 UMPSP11172 480 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 TPH1P17752 444 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 PAICSP22234 425 aaKnown RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 GRM5P41594 1212 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 PMS1P54277 932 aaKnown RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 TTC33Q6PID6 262 aaPredicted RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 MOB2Q70IA6 237 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 LRRC39Q96DD0 335 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 CORO2BQ9UQ03 480 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 ZNF780BQ9Y6R6 833 aa11.37□□□□□ -0.59
FN1-211ENST00000443816 SETD1AO15047 1707 aaKnown RBP11.37□□□□□ -0.59
FN1-211ENST00000443816 KCNK1O00180 336 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms