RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PCDH20Q8N6Y1 951 aaKnown RBP22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 UCMAQ8WVF2 138 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 CLCA2Q9UQC9 943 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 ZNF536O15090 1300 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 FAM155BO75949 473 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 TFEBP19484 476 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 GRIK3Q13003 919 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 SPATA6LQ8N4H0 392 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC44A1Q8WWI5 657 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 LENG1Q96BZ8 264 aaPredicted RBP22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 C12orf65Q9H3J6 166 aaKnown RBP22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 FZD8Q9H461 694 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 RMND5AQ9H871 391 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 GNG14A0A1W2PPG7 69 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 MFSD11O43934 449 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 MAP3K10Q02779 954 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 HECTD3Q5T447 861 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 CERCAMQ5T4B2 595 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 DCLRE1AQ6PJP8 1040 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 OR56A4Q8NGH8 313 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 DPY30Q9C005 99 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 TMEM39AQ9NV64 488 aa22.73■■□□□ 1.23
CTDSPL-206ENST00000443503 ATP6V1B2P21281 511 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 GRIA4P48058 902 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 FNBP1LQ5T0N5 605 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 FAM126BQ8IXS8 530 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 HIC2Q96JB3 615 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 MARK4Q96L34 752 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 SLC25A23Q9BV35 468 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 SEMA4BQ9NPR2 832 aaPredicted RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 NMRK1Q9NWW6 199 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 SCN3BQ9NY72 215 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 RBPJLQ9UBG7 517 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 TOPAZ1Q8N9V7 1692 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 ATP5F1P24539 256 aaPredicted RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 RNASEH2BQ5TBB1 312 aaKnown RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 GDPD5Q8WTR4 605 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 SPOCK2Q92563 424 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 TM6SF2Q9BZW4 377 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 MMADHCQ9H3L0 296 aaPredicted RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 STXBP5LQ9Y2K9 1186 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 A0A087X1B8 175 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 NT5C1B-RDH14C9J2C7 533 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 MSI1O43347 362 aaKnown RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 MSCO60682 206 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 LYPLA1O75608 230 aaPredicted RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 CPSF4O95639 269 aaKnown RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 KLRC2P26717 231 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 MAPK1P28482 360 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 RAP1GDS1P52306 607 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 WNT3AP56704 352 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 TPGS1Q6ZTW0 290 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 FAM9CQ8IZT9 166 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 ZSCAN18Q8TBC5 510 aaPredicted RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 XPR1Q9UBH6 696 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 BAZ2AQ9UIF9 1905 aaKnown RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 MGAT4DA6NG13 374 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 OASLQ15646 514 aaKnown RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 CENPLQ8N0S6 344 aaPredicted RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 FAM120BQ96EK7 910 aaKnown RBP22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 KLHL5Q96PQ7 755 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 CAMKK2Q96RR4 588 aa22.72■■□□□ 1.23
CTDSPL-206ENST00000443503 CKBP12277 381 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 CCL23P55773 120 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 MRPS22P82650 360 aaKnown RBP22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 SP2Q02086 613 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 ZC3H12BQ5HYM0 836 aaKnown RBP22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 TMEM192Q8IY95 271 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 MAML3Q96JK9 1138 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 MAF1Q9H063 256 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 HPS4Q9NQG7 708 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 F8W810 466 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 PSMG1O95456 288 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 ZNF682O95780 498 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 CLPTM1O96005 669 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 SMPD1P17405 629 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 TSPAN8P19075 237 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 IL2P60568 153 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 SP3Q02447 781 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 LRRC8BQ6P9F7 803 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 CCDC81Q6ZN84 652 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 DHFR2Q86XF0 187 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 NSMCE2Q96MF7 247 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 DPEP3Q9H4B8 488 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 CAB39LQ9H9S4 337 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 SORCS3Q9UPU3 1222 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 PMM2O15305 246 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 PAGE1O75459 146 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 SERPINB10P48595 397 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 CACNA2D1P54289 1103 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 STARD3Q14849 445 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 PTGR2Q8N8N7 351 aaPredicted RBP22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 OR6Y1Q8NGX8 325 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 KCTD14Q9BQ13 255 aaPredicted RBP22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 HGH1Q9BTY7 390 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 SENP6Q9GZR1 1112 aaPredicted RBP22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 IL1RAPL1Q9NZN1 696 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 ZMYM5Q9UJ78 669 aa22.71■■□□□ 1.23
CTDSPL-206ENST00000443503 RPTORQ8N122 1335 aa22.7■■□□□ 1.23
CTDSPL-206ENST00000443503 PSMD12O00232 456 aaPredicted RBP22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms