RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CTNNAL1Q9UBT7 734 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 FNDC1Q4ZHG4 1894 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 COL4A4P53420 1690 aaPredicted RBP6.14□□□□□ -1.43
VPS50-205ENST00000441602 SCN5AQ14524 2016 aa6.14□□□□□ -1.43
VPS50-205ENST00000441602 ILVBLA1L0T0 632 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 TEX28O15482 410 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 COCHO43405 550 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 XYLBO75191 536 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 USP1O94782 785 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CYBBP04839 570 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 RB1P06400 928 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 IRF1P10914 325 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ALADP13716 330 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 HMGA1P17096 107 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 GP5P40197 560 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CCT5P48643 541 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CSE1LP55060 971 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 PDE1BQ01064 536 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 GNA12Q03113 381 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 THOC5Q13769 683 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 CRYMQ14894 314 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 SLC14A2Q15849 920 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 C5orf22Q49AR2 442 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ADGRF1Q5T601 910 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 GRTP1Q5TC63 336 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 PDPK2PQ6A1A2 396 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 IL31Q6EBC2 164 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 PDE12Q6L8Q7 609 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 DENND1CQ8IV53 801 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 MDM1Q8TC05 714 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CALML6Q8TD86 181 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ZNF473Q8WTR7 871 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 DCAKDQ8WVC6 231 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CKAP2Q8WWK9 683 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 HERVK_113Q902F9 699 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 BADQ92934 168 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 IFT43Q96FT9 208 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 HMCESQ96FZ2 354 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 APOPT1Q96IL0 206 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 MAGEB18Q96M61 343 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CCT8L2Q96SF2 557 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CPNE1Q99829 537 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 FAM167BQ9BTA0 163 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CINPQ9BW66 212 aaPredicted RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 POLR1EQ9GZS1 481 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 MRM3Q9HC36 420 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 ASAH2Q9NR71 780 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 SYBUQ9NX95 663 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 UBA2Q9UBT2 640 aaPredicted RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 GGA2Q9UJY4 613 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 SOX13Q9UN79 622 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 TIMM44O43615 452 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ATP9BO43861 1147 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 AVILO75366 819 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 HDCP19113 662 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ADRA1DP25100 572 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 BMPR1AP36894 532 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 SMAD3P84022 425 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 SERINC3Q13530 473 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ZNF534Q76KX8 674 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 METTL3Q86U44 580 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 C7orf61Q8IZ16 206 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CCDC197Q8NCU1 140 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 MICAL1Q8TDZ2 1067 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 USP13Q92995 863 aaPredicted RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 CERS2Q96G23 380 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 KLHL5Q96PQ7 755 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 PRMT1Q99873 361 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 KLF16Q9BXK1 252 aaPredicted RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 EURLQ9NYK6 297 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 HEATR9A2RTY3 570 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 SOBPA7XYQ1 873 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CACNG3O60359 315 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 PRAMEF11O60813 436 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 PMPCBO75439 489 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 STC2O76061 302 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 OAS1P00973 400 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 CKMP06732 381 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 C8AP07357 584 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 GABRR2P28476 465 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 PGFP49763 221 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 KCNQ1P51787 676 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 KPNA2P52292 529 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 MTM1Q13496 603 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 SEPT6Q14141 434 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 LBRQ14739 615 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 ANKRD20A4Q4UJ75 823 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 UBAP2Q5T6F2 1119 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 FYB2Q5VWT5 728 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 KLHDC8BQ8IXV7 354 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 ZNF683Q8IZ20 524 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 C4orf33Q8N1A6 199 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 KLHL23Q8NBE8 558 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 NETO2Q8NC67 525 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 CLP1Q92989 425 aaKnown RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 IGSF8Q969P0 613 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 MLPHQ9BV36 600 aaPredicted RBP6.13□□□□□ -1.43
VPS50-205ENST00000441602 ATP13A1Q9HD20 1204 aa6.13□□□□□ -1.43
VPS50-205ENST00000441602 TET1Q8NFU7 2136 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms