RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 CARNMT1Q8N4J0 409 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 ITFG1Q8TB96 612 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 WFDC5Q8TCV5 224 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 USP13Q92995 863 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 APOL2Q9BQE5 337 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 APOL5Q9BWW9 433 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 IGFLR1Q9H665 355 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 TASP1Q9H6P5 420 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 PIDD1Q9HB75 910 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 NT5MQ9NPB1 228 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 TEX264Q9Y6I9 313 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 MYOFQ9NZM1 2061 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 TLDC2A0PJX2 215 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 FGF19O95750 216 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 MT-CYBP00156 380 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 MYZAPP0CAP1 466 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 GYS2P54840 703 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 EIF3BP55884 814 aaKnown RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 YBEYP58557 167 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 CRADDP78560 199 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 ZNF177Q13360 481 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 ANO4Q32M45 955 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 FSCBQ5H9T9 825 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 IL31Q6EBC2 164 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 TPGS1Q6ZTW0 290 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 FAM217AQ8IXS0 508 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 CFAP36Q96G28 342 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 TTC25Q96NG3 672 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 SPON2Q9BUD6 331 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 LMAN2LQ9H0V9 348 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 TMBIM4Q9HC24 238 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 GLOD4Q9HC38 313 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 PLK2Q9NYY3 685 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 PIAS1O75925 651 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 AP2A1O95782 977 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 SESN2P58004 480 aaPredicted RBP19.45■□□□□ 0.7
SNX17-203ENST00000440760 CCDC38Q502W7 563 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 C6orf118Q5T5N4 469 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 TDRD5Q8NAT2 981 aaKnown RBP19.45■□□□□ 0.7
SNX17-203ENST00000440760 HJURPQ8NCD3 748 aaPredicted RBP19.45■□□□□ 0.7
SNX17-203ENST00000440760 PDFQ9HBH1 243 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 VPS18Q9P253 973 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 DPP7Q9UHL4 492 aa19.45■□□□□ 0.7
SNX17-203ENST00000440760 TTC24A2A3L6 582 aaPredicted RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 GOLGA6L10A6NI86 522 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 PRAMEF11O60813 436 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 DDX6P26196 483 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX17-203ENST00000440760 IL10RBQ08334 325 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 EFTUD2Q15029 972 aaKnown RBP eCLIP19.44■□□□□ 0.76e-8■■■■□ 26.1
SNX17-203ENST00000440760 TTC39BQ5VTQ0 682 aaPredicted RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 RNF219Q5W0B1 726 aaPredicted RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 KCTD11Q693B1 232 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 TDHQ8IZJ6 230 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 ATP11CQ8NB49 1132 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 OR52K1Q8NGK4 314 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 TIFAQ96CG3 184 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 TMA16Q96EY4 203 aaKnown RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 FRMD8Q9BZ67 464 aaPredicted RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 MAGEH1Q9H213 219 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 XAB2Q9HCS7 855 aaKnown RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 BCCIPQ9P287 314 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNX17-203ENST00000440760 CTNNAL1Q9UBT7 734 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 MRPS23Q9Y3D9 190 aaKnown RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 H0Y626 953 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 GJB3O75712 270 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 ABHD2P08910 425 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 PFKLP17858 780 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 CDK16Q00536 496 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 HNRNPDQ14103 355 aaKnown RBP19.44■□□□□ 0.7
SNX17-203ENST00000440760 MARC1Q5VT66 337 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 LEMD2Q8NC56 503 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 MUC3BQ9H195 1237 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 PLAC1Q9HBJ0 212 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 ATP13A1Q9HD20 1204 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 TDP1Q9NUW8 608 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 TBC1D30Q9Y2I9 924 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 MAD1L1Q9Y6D9 718 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 MYLKQ15746 1914 aa19.44■□□□□ 0.7
SNX17-203ENST00000440760 MIA3Q5JRA6 1907 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 PRRC2BQ5JSZ5 2229 aaKnown RBP19.43■□□□□ 0.7
SNX17-203ENST00000440760 A0A087WUV0 522 aaPredicted RBP19.43■□□□□ 0.7
SNX17-203ENST00000440760 TYW5A2RUC4 315 aaKnown RBP19.43■□□□□ 0.7
SNX17-203ENST00000440760 GOLGA8KD6RF30 607 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 LUC7L3O95232 432 aaKnown RBP19.43■□□□□ 0.7
SNX17-203ENST00000440760 CPP00450 1065 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 MGAT1P26572 445 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 MZF1P28698 734 aaPredicted RBP19.43■□□□□ 0.7
SNX17-203ENST00000440760 MMP13P45452 471 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 KCNC3Q14003 757 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 DNAJC21Q5F1R6 531 aaKnown RBP19.43■□□□□ 0.7
SNX17-203ENST00000440760 LRRC8BQ6P9F7 803 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 PALM2Q8IXS6 379 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 PGBD5Q8N414 524 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 DDI1Q8WTU0 396 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 SIGLEC10Q96LC7 697 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 CLEC4EQ9ULY5 219 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 ILVBLA1L0T0 632 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 MUSKO15146 869 aa19.43■□□□□ 0.7
SNX17-203ENST00000440760 LINC01565O15544 149 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms