RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CXCR3P49682 368 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 SGSHP51688 502 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 GDF10P55107 478 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 KDSRQ06136 332 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 ZNF844Q08AG5 666 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 EIF4EBP2Q13542 120 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 KRT71Q3SY84 523 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 SLC45A4Q5BKX6 768 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 FAM133BQ5BKY9 247 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 BRMS1LQ5PSV4 323 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 RNASEH2BQ5TBB1 312 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 FSTL4Q6MZW2 842 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 RFX8Q6ZV50 586 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 FAM76AQ8TAV0 307 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 TKTL2Q9H0I9 626 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 ARHGEF4Q9NR80 690 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 PLK2Q9NYY3 685 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 SNX10Q9Y5X0 201 aa14.9□□□□□ -0.02
TNFRSF1A-204ENST00000440083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 HMGB1P1B2RPK0 211 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 PPP1R12AO14974 1030 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 HOXC11O43248 304 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RIPK2O43353 540 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ACSL4O60488 711 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 EGFP01133 1207 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 AOC1P19801 751 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RBL1P28749 1068 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 SLC6A4P31645 630 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 GALK1P51570 392 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 BASP1P80723 227 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 GBE1Q04446 702 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RING1Q06587 406 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 NR1H3Q13133 447 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 FZD5Q13467 585 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 NUGGCQ68CJ6 796 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 HEATR6Q6AI08 1181 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RFWD3Q6PCD5 774 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 PPP1R21Q6ZMI0 780 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 CENPUQ71F23 418 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 SUGP1Q8IWZ8 645 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 FAM217AQ8IXS0 508 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 OR2W6PQ8NHA6 318 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 EZH1Q92800 747 aaPredicted RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TTC25Q96NG3 672 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 P2RY13Q9BPV8 354 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 BBS2Q9BXC9 721 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TMBIM4Q9HC24 238 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 SAYSD1Q9NPB0 183 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ANLNQ9NQW6 1124 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TMPRSS4Q9NRS4 437 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 DNAJC17Q9NVM6 304 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ZNF510Q9Y2H8 683 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 KIAA1549LQ6ZVL6 1849 aa14.89□□□□□ -0.03
TNFRSF1A-204ENST00000440083 I6L893 689 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 GFRA2O00451 464 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 MFSD11O43934 449 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 APOEP02649 317 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TYRP14679 529 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 MLLT6P55198 1093 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ARL4CP56559 192 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 GAD2Q05329 585 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 DPYSQ14117 519 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 PDK1Q15118 436 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TTMPQ5BVD1 217 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 AGBL2Q5U5Z8 902 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 FYB2Q5VWT5 728 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 Q6ZS52 159 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ETFBKMTQ8IXQ9 262 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TFB1MQ8WVM0 346 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 PRCCQ92733 491 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ARL8AQ96BM9 186 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RTP4Q96DX8 246 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 MSANTD3Q96H12 275 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ATP6V1G3Q96LB4 118 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 PRICKLE1Q96MT3 831 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RBM15Q96T37 977 aaKnown RBP eCLIP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 KLC2Q9H0B6 622 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 SEMA4AQ9H3S1 761 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 MARK1Q9P0L2 795 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 STOML2Q9UJZ1 356 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 CLEC4EQ9ULY5 219 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 MRPS17Q9Y2R5 130 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 SIT1Q9Y3P8 196 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 RAD54BQ9Y620 910 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 NFS1Q9Y697 457 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ATG2BQ96BY7 2078 aa14.88□□□□□ -0.03
TNFRSF1A-204ENST00000440083 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TP73O15350 636 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 TULP3O75386 442 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 MAP3K6O95382 1288 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 ACSL3O95573 720 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 LATS1O95835 1130 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 PENKP01210 267 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 IVLP07476 585 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 CHRNB1P11230 501 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 AVPR2P30518 371 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 CCR1P32246 355 aa14.87□□□□□ -0.03
TNFRSF1A-204ENST00000440083 SERPINB6P35237 376 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms