RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 RFWD3Q6PCD5 774 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MFSD7Q6UXD7 560 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PRR23BQ6ZRT6 265 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ALYREFQ86V81 257 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 XYLT1Q86Y38 959 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CCNJLQ8IV13 435 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 DENND1CQ8IV53 801 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 BBS7Q8IWZ6 715 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PGBD3Q8N328 593 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 WDTC1Q8N5D0 677 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 FBF1Q8TES7 1133 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 FAM3CQ92520 227 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 RNF34Q969K3 372 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MTBPQ96DY7 904 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MCEEQ96PE7 176 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF670Q9BS34 389 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LRRC3Q9BY71 257 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TPSD1Q9BZJ3 242 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TASP1Q9H6P5 420 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LMAN1LQ9HAT1 526 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 GDE1Q9NZC3 331 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PAK5Q9P286 719 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 IGSF9Q9P2J2 1179 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 R3HDM2Q9Y2K5 976 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 USH1CQ9Y6N9 552 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 IQANK1A0A1B0GTG1 560 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 SLC12A8A0AV02 714 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 RASA4BC9J798 803 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LEFTY2O00292 366 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 ZZEF1O43149 2961 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 RASA4O43374 803 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TYROBPO43914 113 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LRCH4O75427 683 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 STK10O94804 968 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MICAL2O94851 1124 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TRUB2O95900 331 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 VIMP08670 466 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 KRT15P19012 456 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 GPD1P21695 349 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TIE1P35590 1138 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PTPN9P43378 593 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 AIF1P55008 147 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PITX1P78337 314 aaPredicted RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CSTF1Q05048 431 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 SNX1Q13596 522 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 FRG1Q14331 258 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 NOMO1Q15155 1222 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MLF2Q15773 248 aaPredicted RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LONRF1Q17RB8 773 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PREPLQ4J6C6 727 aaPredicted RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LY6G5CQ5SRR4 150 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 FAM182AQ5T1J6 154 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 LGSNQ5TDP6 509 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 BTBD8Q5XKL5 378 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 MTSS1LQ765P7 747 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 BZW1Q7L1Q6 419 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC25Q86WR0 208 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM25Q86YD3 366 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PDIK1LQ8N165 341 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 AGGF1Q8N302 714 aaeCLIP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 CCDC63Q8NA47 563 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 NETO2Q8NC67 525 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 SPATA18Q8TC71 538 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 RLN3Q8WXF3 142 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 SORCS1Q8WY21 1168 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 IRF7Q92985 503 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 PKMYT1Q99640 499 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 HERPUD2Q9BSE4 406 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 DDX23Q9BUQ8 820 aaKnown RBP4.87□□□□□ -1.63
EDEM3-203ENST00000439962 SIK2Q9H0K1 926 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 DNPEPQ9ULA0 475 aa4.87□□□□□ -1.63
EDEM3-203ENST00000439962 TBC1D3BA6NDS4 549 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 PRR33A8MZF0 331 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 HACD1B0YJ81 288 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 E5RJQ4 531 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DCLK1O15075 740 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ACSL3O95573 720 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MLNP12872 115 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TPSB2P20231 275 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TAC1P20366 129 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 HOXA9P31269 272 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 GPD2P43304 727 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ACADSBP45954 432 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CCNG1P51959 295 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 GPS1Q13098 491 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MTAPQ13126 283 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SETDB1Q15047 1291 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 TPSAB1Q15661 275 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 PTPN20Q4JDL3 420 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SLC45A4Q5BKX6 768 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CWF19L1Q69YN2 538 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SLC9A4Q6AI14 798 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 OR6B2Q6IFH4 312 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ASRGL1Q7L266 308 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 C12orf40Q86WS4 652 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CDKL3Q8IVW4 592 aaPredicted RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MFSD6LQ8IWD5 586 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 DCLK2Q8N568 766 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms