RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TEX45Q8NA69 505 aa4.04□□□□□ -1.76
PTPN4-205ENST00000433888 HES6Q96HZ4 224 aa4.04□□□□□ -1.76
PTPN4-205ENST00000433888 HDHD5Q9BXW7 423 aa4.04□□□□□ -1.76
PTPN4-205ENST00000433888 SPRY4Q9C004 299 aa4.04□□□□□ -1.76
PTPN4-205ENST00000433888 GAREM1Q9H706 876 aa4.04□□□□□ -1.76
PTPN4-205ENST00000433888 SLC39A10Q9ULF5 831 aa4.04□□□□□ -1.76
PTPN4-205ENST00000433888 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 HSPB6O14558 160 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 KCNJ13O60928 360 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 SP1P08047 785 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 PRKCHP24723 683 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 AKT1P31749 480 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 RCAN1P53805 252 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 MRGPRG-AS1Q2M3A8 158 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 FAM171A1Q5VUB5 890 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 MTFR2Q6P444 385 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 ZDHHC23Q8IYP9 409 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 SLC35F5Q8WV83 523 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 RSC1A1Q92681 617 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 SLC25A33Q9BSK2 321 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 OCIAD1Q9NX40 245 aa4.03□□□□□ -1.76
PTPN4-205ENST00000433888 AGO1Q9UL18 857 aaKnown RBP4.03□□□□□ -1.76
PTPN4-205ENST00000433888 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 IGHV4-28A0A0C4DH34 117 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 AGAP5A6NIR3 686 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 BMPR1BO00238 502 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 TMCC1O94876 653 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 CGAP01215 116 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 HLA-DQA2P01906 255 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 MYL3P08590 195 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 F7P08709 466 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-205ENST00000433888 CDK7P50613 346 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 HLFQ16534 295 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 C5orf22Q49AR2 442 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 ZNF771Q7L3S4 317 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-205ENST00000433888 PJA1Q8NG27 643 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 LILRB1Q8NHL6 650 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-205ENST00000433888 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 IGSF21Q96ID5 467 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 PRPF18Q99633 342 aaKnown RBP4.02□□□□□ -1.77
PTPN4-205ENST00000433888 CEP83Q9Y592 693 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 PCDHGB2Q9Y5G2 931 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 PCDHA10Q9Y5I2 948 aa4.02□□□□□ -1.77
PTPN4-205ENST00000433888 HEXIM1O94992 359 aaKnown RBP4.01□□□□□ -1.77
PTPN4-205ENST00000433888 TYK2P29597 1187 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 CDH12P55289 794 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 RNASELQ05823 741 aaKnown RBP4.01□□□□□ -1.77
PTPN4-205ENST00000433888 SLC39A14Q15043 492 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 ZACNQ401N2 412 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 SYTL3Q4VX76 610 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 MON1BQ7L1V2 547 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 TRIM74Q86UV6 250 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 TRIM73Q86UV7 250 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 OR1N1Q8NGS0 311 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 FRG2BQ96QU4 278 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 NODALQ96S42 347 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 PDE11AQ9HCR9 933 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 SEL1LQ9UBV2 794 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 CDH22Q9UJ99 828 aa4.01□□□□□ -1.77
PTPN4-205ENST00000433888 SRPRBQ9Y5M8 271 aaKnown RBP4.01□□□□□ -1.77
PTPN4-205ENST00000433888 GREB1LQ9C091 1923 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-205ENST00000433888 NPIPB13A6NJU9 1138 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 NPIPB5A8MRT5 1133 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 NPIPB4C9JG80 1138 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 BUB3O43684 328 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 CLDN7O95471 211 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 FCGR2AP12318 317 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 ENO3P13929 434 aaPredicted RBP4□□□□□ -1.77
PTPN4-205ENST00000433888 DAOP14920 347 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 OAZ1P54368 228 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 CDK18Q07002 472 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 MYBPC2Q14324 1141 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 RBM39Q14498 530 aaKnown RBP4□□□□□ -1.77
PTPN4-205ENST00000433888 BTBD16Q32M84 506 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 RNF144BQ7Z419 303 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 C11orf96Q7Z7L8 435 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 HMGB4Q8WW32 186 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 KIAA1191Q96A73 305 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 CERS4Q9HA82 394 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 LIN7CQ9NUP9 197 aaKnown RBP4□□□□□ -1.77
PTPN4-205ENST00000433888 DONSONQ9NYP3 566 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 FNIP2Q9P278 1114 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 OSGIN2Q9Y236 505 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 SLC45A1Q9Y2W3 748 aa4□□□□□ -1.77
PTPN4-205ENST00000433888 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.99□□□□□ -1.77
PTPN4-205ENST00000433888 C17orf102A2RUQ5 167 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 LINC01553A4QN01 128 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 PRR23AA6NEV1 266 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 GRM8O00222 908 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 ASNA1O43681 348 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 ZNF449Q6P9G9 518 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 SERPINA11Q86U17 422 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 MIGA1Q8NAN2 632 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 ZNF114Q8NC26 417 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 SLC2A12Q8TD20 617 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 C2CD4CQ8TF44 421 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 FAR1Q8WVX9 515 aa3.99□□□□□ -1.77
PTPN4-205ENST00000433888 GFM1Q96RP9 751 aaKnown RBP3.99□□□□□ -1.77
PTPN4-205ENST00000433888 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.99□□□□□ -1.771e-6■■■■□ 24.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms