RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 MT-CO3P00414 261 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 PRNPP04156 253 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 CTSLP07711 333 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 RHOCP08134 193 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 ALPPL2P10696 532 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 HNRNPA2B1P22626 353 aaKnown RBP15.25■□□□□ 0.03
PRKDC-203ENST00000432581 CHRNA3P32297 505 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 IRAK1P51617 712 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 CLCN6P51797 869 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 ARHGAP44Q17R89 818 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 ZNF284Q2VY69 593 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 BRMS1LQ5PSV4 323 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 ACBD5Q5T8D3 534 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-203ENST00000432581 GJB7Q6PEY0 223 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 FAM183BPQ6ZVS7 135 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 C14orf80Q86SX3 495 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 SETD3Q86TU7 594 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-203ENST00000432581 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 ZNF397Q8NF99 534 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-203ENST00000432581 FAM174AQ8TBP5 190 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 SHC3Q92529 594 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 IFT43Q96FT9 208 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 SYNCQ9H7C4 482 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 RAI2Q9Y5P3 530 aa15.25■□□□□ 0.03
PRKDC-203ENST00000432581 ARID1BQ8NFD5 2236 aaPredicted RBP15.25■□□□□ 0.03
PRKDC-203ENST00000432581 TP53BP1Q12888 1972 aaPredicted RBP15.24■□□□□ 0.03
PRKDC-203ENST00000432581 TEX51A0A1B0GUA7 166 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 M0QYT0 321 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 PIAS2O75928 621 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 MT-CO1P00395 513 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 CKMT1AP12532 417 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 PRLRP16471 622 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 KRT9P35527 623 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 GGCXP38435 758 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 SLC6A3Q01959 620 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 PTK2Q05397 1052 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 KDM7AQ6ZMT4 941 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 GPR155Q7Z3F1 870 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 ZDHHC17Q8IUH5 632 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 DCAF4L2Q8NA75 395 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 C1orf131Q8NDD1 294 aaKnown RBP15.24■□□□□ 0.03
PRKDC-203ENST00000432581 OR2A12Q8NGT7 310 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 PPP1R16AQ96I34 528 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 MYOCQ99972 504 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 CALN1Q9BXU9 219 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 HDAC8Q9BY41 377 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 SIK2Q9H0K1 926 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 WDCPQ9H6R7 721 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 USP29Q9HBJ7 922 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 EVA1BQ9NVM1 165 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 VPS51Q9UID3 782 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
PRKDC-203ENST00000432581 FLNBO75369 2602 aaKnown RBP15.23■□□□□ 0.03
PRKDC-203ENST00000432581 NYNRINQ9P2P1 1898 aaKnown RBP15.23■□□□□ 0.03
PRKDC-203ENST00000432581 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
PRKDC-203ENST00000432581 NEMP2A6NFY4 417 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 SNAP91O60641 907 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 CNTN5O94779 1100 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 PRB1P04280 392 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 ERBB2P04626 1255 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 SLC9A1P19634 815 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 RRM1P23921 792 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 RECQLP46063 649 aaPredicted RBP15.23■□□□□ 0.03
PRKDC-203ENST00000432581 CXCR3P49682 368 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 TLE3Q04726 772 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 EXOC3L4Q17RC7 722 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 ALFQ53S48 1182 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 ERN2Q76MJ5 926 aaKnown RBP15.23■□□□□ 0.03
PRKDC-203ENST00000432581 ABI3BPQ7Z7G0 1075 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 ERICH1Q86X53 443 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 DCP2Q8IU60 420 aaKnown RBP15.23■□□□□ 0.03
PRKDC-203ENST00000432581 OR13H1Q8NG92 308 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 KLK6Q92876 244 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 ARRDC3Q96B67 414 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 PSMB7Q99436 277 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 DUSP23Q9BVJ7 150 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 TKTL2Q9H0I9 626 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 PIGVQ9NUD9 493 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 UCKL1Q9NWZ5 548 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 NLGN3Q9NZ94 848 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 STAP1Q9ULZ2 295 aa15.23■□□□□ 0.03
PRKDC-203ENST00000432581 DRGXA6NNA5 263 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 A6NNZ2 444 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 K7ERQ8 282 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 FFAR2O15552 330 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 OPA1O60313 960 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 PCDH8O95206 1070 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 ADCY5O95622 1261 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 F9P00740 461 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 GP1BAP07359 652 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 DUSP3P51452 185 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-203ENST00000432581 CCDC173Q0VFZ6 552 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 OTUD1Q5VV17 481 aaPredicted RBP15.22■□□□□ 0.03
PRKDC-203ENST00000432581 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 C22orf39Q6P5X5 142 aa15.22■□□□□ 0.03
PRKDC-203ENST00000432581 GCNT7Q6ZNI0 430 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms