RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 BZW1Q7L1Q6 419 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 LRRC49Q8IUZ0 686 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 SPEM1Q8N4L4 309 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 ATPAF2Q8N5M1 289 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 TMEM105Q8N8V8 129 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 ATP11CQ8NB49 1132 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 MYO19Q96H55 970 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 C11orf16Q9NQ32 467 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 DTLQ9NZJ0 730 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 SUN2Q9UH99 717 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 MMP17Q9ULZ9 603 aa13.13□□□□□ -0.31
CCHCR1-205ENST00000428174 TTC34A8MYJ7 566 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 J3KR12 359 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 SGK1O00141 431 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 ATP9BO43861 1147 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 ADAM23O75077 832 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 SRCP12931 536 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 HLA-EP13747 358 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 HOXB2P14652 356 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 PRKCHP24723 683 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 AVPR2P30518 371 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 GARSP41250 739 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 NR2C2P49116 596 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 SERPINH1P50454 418 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 CLCN6P51797 869 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 IL10RBQ08334 325 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 MTAPQ13126 283 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 STARD3Q14849 445 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 DLG2Q15700 870 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 ARHGAP36Q6ZRI8 547 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 ZNF366Q8N895 744 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 CASKIN2Q8WXE0 1202 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 P3H4Q92791 437 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 WDR24Q96S15 920 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 GABRG3Q99928 467 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 HERPUD2Q9BSE4 406 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 TMEM245Q9H330 911 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 SPATA6Q9NWH7 488 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 UBA2Q9UBT2 640 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 CHD5Q8TDI0 1954 aa13.12□□□□□ -0.31
CCHCR1-205ENST00000428174 APOC4-APOC2K7ER74 178 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 K7ERQ8 282 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 PPP1R12AO14974 1030 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 CEP104O60308 925 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 SYNCRIPO60506 623 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 MAFKO60675 156 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 TMCC1O94876 653 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 CD160O95971 181 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 APOC2P02655 101 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 EPHX1P07099 455 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 CXCL12P48061 93 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 CCR3P51677 355 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 PDK1Q15118 436 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 INO80DQ53TQ3 878 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 TIGD7Q6NT04 549 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 MAMSTRQ6ZN01 415 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 METTL3Q86U44 580 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 DTWD2Q8NBA8 298 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 CCNYQ8ND76 341 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 PBKQ96KB5 322 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 TSGA13Q96PP4 275 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 CEP44Q9C0F1 390 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 BRD8Q9H0E9 1235 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 MTG2Q9H4K7 406 aa13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 SAE1Q9UBE0 346 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 FCF1Q9Y324 198 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-205ENST00000428174 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 CCNCP24863 283 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 CXCR5P32302 372 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 ETF1P62495 437 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 SATB1Q01826 763 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 CRY1Q16526 586 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 TMCO4Q5TGY1 634 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 C22orf39Q6P5X5 142 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 PCDH20Q8N6Y1 951 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
CCHCR1-205ENST00000428174 ACTL9Q8TC94 416 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms