RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 EIF3EP60228 445 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MVKQ03426 396 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RUNX1T1Q06455 604 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GALNT2Q10471 571 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MERTKQ12866 999 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 LAMC2Q13753 1193 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PDK1Q15118 436 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SKIV2LQ15477 1246 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 HLFQ16534 295 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AOC3Q16853 763 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCDC142Q17RM4 750 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SBK1Q52WX2 424 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ESCO2Q56NI9 601 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PIGGQ5H8A4 983 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 FGD3Q5JSP0 725 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 VWA5B1Q5TIE3 1220 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AGAP9Q5VTM2 703 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AGAP6Q5VW22 663 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ACAD10Q6JQN1 1059 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 METTL2BQ6P1Q9 378 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TAF2Q6P1X5 1199 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TIFABQ6ZNK6 161 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCTD8Q6ZWB6 473 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRSS48Q7RTY5 328 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 DGLUCYQ7Z3D6 616 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCTD20Q7Z5Y7 419 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 LINC00523Q86TU6 105 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AQP12AQ8IXF9 295 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GALNT12Q8IXK2 581 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PPM1KQ8N3J5 372 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCDC185Q8N715 623 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM102Q8N9M5 508 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PNMA1Q8ND90 353 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ST13P5Q8NFI4 369 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR7A2PQ8NGA2 310 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR10Z1Q8NGY1 313 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 LHFPL5Q8TAF8 219 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MZB1Q8WU39 189 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RSAD2Q8WXG1 361 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PIK3R3Q92569 461 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 HSPH1Q92598 858 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PROX1Q92786 737 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM149B1Q96BN6 582 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF496Q96IT1 587 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 DCAF5Q96JK2 942 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 FEM1CQ96JP0 617 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZFP42Q96MM3 310 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF578Q96N58 590 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TSNARE1Q96NA8 513 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RPRD1AQ96P16 312 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 AGAP4Q96P64 663 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PNMA5Q96PV4 448 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CSRNP1Q96S65 589 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 EYA3Q99504 573 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MTG1Q9BT17 334 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM121Q9BTD3 319 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADI1Q9BV57 179 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SEZ6LQ9BYH1 1024 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ASPSCR1Q9BZE9 553 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM117AQ9C073 453 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ING2Q9H160 280 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MMP27Q9H306 513 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 DPEP3Q9H4B8 488 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PDZD7Q9H5P4 517 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SYNDIG1Q9H7V2 258 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 IFT22Q9H7X7 185 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TMEM206Q9H813 350 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 ACAD9Q9H845 621 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 JMJD4Q9H9V9 463 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 WDR41Q9HAD4 459 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SIAEQ9HAT2 523 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCNB1IP1Q9NPC3 277 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CHST7Q9NS84 486 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 IARS2Q9NSE4 1012 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 PAK1IP1Q9NWT1 392 aaPredicted RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MRPL39Q9NYK5 338 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MOCS1Q9NZB8 636 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TXNDC16Q9P2K2 825 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 SLC17A7Q9P2U7 560 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MTRRQ9UBK8 725 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 WARS2Q9UGM6 360 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 IP6K2Q9UHH9 426 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RAPGEFL1Q9UHV5 662 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 GLS2Q9UI32 602 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MKLN1Q9UL63 735 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TLR6Q9Y2C9 796 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RBMX2Q9Y388 322 aaKnown RBP5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 RWDD3Q9Y3V2 267 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 CSNK1G3Q9Y6M4 447 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAU2Q9Y6X3 613 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 IGSF9BQ9UPX0 1349 aa5.7□□□□□ -1.5
VTI1BP4-201ENST00000427516 TNRC6CQ9HCJ0 1690 aaKnown RBP5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 BBIP1A8MTZ0 92 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 FOXO6A8MYZ6 492 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 LOC110117498-PIK3R3F6TDL0 507 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 J3QRK9 145 aa5.69□□□□□ -1.5
VTI1BP4-201ENST00000427516 EEF2KO00418 725 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms