RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 CTHP32929 405 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 CD70P32970 193 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 ACTN2P35609 894 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 ACVRL1P37023 503 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 DRG2P55039 364 aaKnown RBP12.3□□□□□ -0.44
HDLBP-215ENST00000427487 PRKCQQ04759 706 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDLBP-215ENST00000427487 AP1B1Q10567 949 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 ALG1LQ6GMV1 187 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 CCDC70Q6NSX1 233 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 TTC27Q6P3X3 843 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 CCDC89Q8N998 374 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 OR7D4Q8NG98 312 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 UCMAQ8WVF2 138 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 RUBCNQ92622 972 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 CHFRQ96EP1 664 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 SPATA13Q96N96 652 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 FAM129AQ9BZQ8 928 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 DDX47Q9H0S4 455 aaKnown RBP12.3□□□□□ -0.44
HDLBP-215ENST00000427487 PAK5Q9P286 719 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 UBA2Q9UBT2 640 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-215ENST00000427487 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 SEPT3Q9UH03 358 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 VPS51Q9UID3 782 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
HDLBP-215ENST00000427487 F5P12259 2224 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 SPECC1L-ADORA2AF8WAN1 911 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 SMAPO00193 183 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 KCNN4O15554 427 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 KAT7O95251 611 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 APODP05090 189 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 VAV1P15498 845 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 POLR2EP19388 210 aaKnown RBP12.29□□□□□ -0.44
HDLBP-215ENST00000427487 DRD1P21728 446 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 PTPN3P26045 913 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 RBL1P28749 1068 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 PTGIRP43119 386 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 CSNK1DP48730 415 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 SERPINH1P50454 418 aaKnown RBP12.29□□□□□ -0.44
HDLBP-215ENST00000427487 ARF5P84085 180 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 ECT2LQ008S8 904 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 DR1Q01658 176 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 PTK6Q13882 451 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 FUT11Q495W5 492 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-215ENST00000427487 FBXO43Q4G163 708 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 TMEM196Q5HYL7 178 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 MARC1Q5VT66 337 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 MBLAC2Q68D91 279 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 ITPRIPL1Q6GPH6 555 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-215ENST00000427487 C12orf40Q86WS4 652 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 TP53INP2Q8IXH6 220 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 KLHDC8BQ8IXV7 354 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 SEC14L1Q92503 715 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 BHMTQ93088 406 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 TEKT5Q96M29 485 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 PSKH2Q96QS6 385 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 KRT12Q99456 494 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 P2RY13Q9BPV8 354 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 TMEM121Q9BTD3 319 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 SPON2Q9BUD6 331 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 ELOVL2Q9NXB9 296 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 SLC25A13Q9UJS0 675 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 TICRRQ7Z2Z1 1910 aa12.29□□□□□ -0.44
HDLBP-215ENST00000427487 J3KR12 359 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 SGK1O00141 431 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 CBX4O00257 560 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 ATP9BO43861 1147 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 CD160O95971 181 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 ASGR2P07307 311 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 TUBBP07437 444 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 HNRNPLP14866 589 aaKnown RBP eCLIP12.28□□□□□ -0.444e-18■□□□□ 11
HDLBP-215ENST00000427487 NNMTP40261 264 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 MAPK8P45983 427 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 KCNJ1P48048 391 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 C2orf54Q08AI8 447 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
HDLBP-215ENST00000427487 GEN1Q17RS7 908 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 SLC44A4Q53GD3 710 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 C8orf74Q6P047 294 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 NAT16Q8N8M0 369 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 FAM71DQ8N9W8 422 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 SHDQ96IW2 340 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 CCDC114Q96M63 670 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 MGME1Q9BQP7 344 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 RAB17Q9H0T7 212 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 VPS45Q9NRW7 570 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 ATP8A1Q9Y2Q0 1164 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
HDLBP-215ENST00000427487 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
HDLBP-215ENST00000427487 TBC1D3BA6NDS4 549 aa12.27□□□□□ -0.45
HDLBP-215ENST00000427487 ERI2A8K979 691 aaKnown RBP12.27□□□□□ -0.45
HDLBP-215ENST00000427487 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-215ENST00000427487 RNF103O00237 685 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms