RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 NENFQ9UMX5 172 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
SNX3-204ENST00000426155 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
SNX3-204ENST00000426155 CACNA1EQ15878 2313 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 DCDC2BA2VCK2 349 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 RNASEH1O60930 286 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 MFAP3LO75121 409 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 SEMA4FO95754 770 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 CD160O95971 181 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 CTSLP07711 333 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 MYBL1P10243 752 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 MIPP30301 263 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 HNRNPH3P31942 346 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 DRD3P35462 400 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 MAPKAPK2P49137 400 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 STPG1Q5TH74 334 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 C22orf39Q6P5X5 142 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 ALKBH5Q6P6C2 394 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 CPNE8Q86YQ8 564 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 ZCCHC9Q8N567 271 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 NETO2Q8NC67 525 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 CHST14Q8NCH0 376 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 OR2I1PQ8NGU4 316 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 OR8D1Q8WZ84 308 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 ARHGEF2Q92974 986 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 PPP1R9BQ96SB3 815 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 KCTD15Q96SI1 283 aaPredicted RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 DNAJC7Q99615 494 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 EPAS1Q99814 870 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 ACE2Q9BYF1 805 aaPredicted RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 BTBD1Q9H0C5 482 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 NEUROG2Q9H2A3 272 aa13.93□□□□□ -0.18
SNX3-204ENST00000426155 DHX35Q9H5Z1 703 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
SNX3-204ENST00000426155 ANKRD36A6QL64 1941 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 METTL12A8MUP2 240 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 SLC30A4O14863 429 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 RAMP2O60895 175 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
SNX3-204ENST00000426155 DESP17661 470 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 ENGP17813 658 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 IL1R2P27930 398 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 MAPK8P45983 427 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 SERPINH1P50454 418 aaKnown RBP13.92□□□□□ -0.18
SNX3-204ENST00000426155 TPI1P60174 286 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 TRIM14Q14142 442 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 GSE1Q14687 1217 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 SMTNL2Q2TAL5 461 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 TXNRD3NBQ6F5E7 133 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 SLC23A3Q6PIS1 610 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 GAS2L3Q86XJ1 694 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 RTL3Q8N8U3 475 aaKnown RBP13.92□□□□□ -0.18
SNX3-204ENST00000426155 CADM4Q8NFZ8 388 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 OR8K1Q8NGG5 319 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 OR2A12Q8NGT7 310 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 FNIP1Q8TF40 1166 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 BIRC7Q96CA5 298 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 CHP1Q99653 195 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 OMDQ99983 421 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 NUP85Q9BW27 656 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 MRPL47Q9HD33 250 aaKnown RBP13.92□□□□□ -0.18
SNX3-204ENST00000426155 EVLQ9UI08 416 aaPredicted RBP13.92□□□□□ -0.18
SNX3-204ENST00000426155 ANAPC7Q9UJX3 599 aa13.92□□□□□ -0.18
SNX3-204ENST00000426155 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.92□□□□□ -0.18
SNX3-204ENST00000426155 ASCC3Q8N3C0 2202 aaKnown RBP13.91□□□□□ -0.18
SNX3-204ENST00000426155 SHROOM3Q8TF72 1996 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 C4orf47A7E2U8 309 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 CDX4O14627 284 aaPredicted RBP13.91□□□□□ -0.18
SNX3-204ENST00000426155 MCF2LO15068 1137 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 FOXD2O60548 495 aaPredicted RBP13.91□□□□□ -0.18
SNX3-204ENST00000426155 RNF8O76064 485 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 FSBPO95073 299 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 ADH1BP00325 375 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 CYP1A2P05177 515 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 GOT1P17174 413 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 GALCP54803 685 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 AIF1P55008 147 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 PUM1Q14671 1186 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNX3-204ENST00000426155 POLD3Q15054 466 aaPredicted RBP13.91□□□□□ -0.18
SNX3-204ENST00000426155 DUOXA1Q1HG43 343 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 ASTE1Q2TB18 679 aaPredicted RBP13.91□□□□□ -0.18
SNX3-204ENST00000426155 PPP6R3Q5H9R7 873 aaPredicted RBP13.91□□□□□ -0.18
SNX3-204ENST00000426155 KCNT1Q5JUK3 1230 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 WDR45BQ5MNZ6 344 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 SYCP2LQ5T4T6 812 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 ERMARDQ5T6L9 678 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 NCEH1Q6PIU2 408 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 SARM1Q6SZW1 724 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 LAYNQ6UX15 382 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 USP30Q70CQ3 517 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 ZNF354CQ86Y25 554 aa13.91□□□□□ -0.18
SNX3-204ENST00000426155 OR6K2Q8NGY2 324 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms