RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 CASC4Q6P4E1 433 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 SPATA31D4Q6ZUB0 917 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 PRPF39Q86UA1 669 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 TMC8Q8IU68 726 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CCDC117Q8IWD4 279 aaPredicted RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 SRRM1Q8IYB3 904 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 ELMOD1Q8N336 334 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 MDM1Q8TC05 714 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 MZB1Q8WU39 189 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 MRPS31Q92665 395 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 IL22Q9GZX6 179 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 EPN3Q9H201 632 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CCDC134Q9H6E4 229 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 ENTPD7Q9NQZ7 604 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 INTS9Q9NV88 658 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 SYBUQ9NX95 663 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 SAMD15Q9P1V8 674 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 PLXNA4Q9HCM2 1894 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CEP290O15078 2479 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 J3KR12 359 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 PRPF4O43172 522 aaKnown RBP eCLIP14.68□□□□□ -0.061e-25■■■■■ 30
CDK3-201ENST00000425876 PRAMEF11O60813 436 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 POLBP06746 335 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CREB1P16220 341 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 HDCP19113 662 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 GABRR2P28476 465 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CDC25CP30307 473 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 ADRA1AP35348 466 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 MPP3Q13368 585 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CRYMQ14894 314 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 SPANXN3Q5MJ09 141 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 LGSNQ5TDP6 509 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 TTC19Q6DKK2 380 aaPredicted RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 RFWD3Q6PCD5 774 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 SETD3Q86TU7 594 aaPredicted RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 TMEM135Q86UB9 458 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 CIR1Q86X95 450 aaPredicted RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 DNAAF3Q8N9W5 541 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 ATXN2LQ8WWM7 1075 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 ALKBH8Q96BT7 664 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 PRICKLE1Q96MT3 831 aaPredicted RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 GDF15Q99988 308 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 TRABDQ9H4I3 376 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 TLR9Q9NR96 1032 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 VPS45Q9NRW7 570 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 SMG5Q9UPR3 1016 aaKnown RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 ZFP37Q9Y6Q3 630 aaPredicted RBP14.68□□□□□ -0.06
CDK3-201ENST00000425876 LAMA3Q16787 3333 aa14.68□□□□□ -0.06
CDK3-201ENST00000425876 FAM237BA0A1B0GVD1 139 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 A0A1B0GVM2 712 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 ILVBLA1L0T0 632 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 LINC01553A4QN01 128 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 TCAF2A6NFQ2 919 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 SLC7A9P82251 487 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 SMAD3P84022 425 aaKnown RBP14.67□□□□□ -0.06
CDK3-201ENST00000425876 GNA12Q03113 381 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 TMCO4Q5TGY1 634 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 Q6ZNB5 142 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 GAREM2Q75VX8 874 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 PPM1NQ8N819 430 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 SPATA22Q8NHS9 363 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 POF1BQ8WVV4 589 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 IMP4Q96G21 291 aaKnown RBP14.67□□□□□ -0.06
CDK3-201ENST00000425876 SMC6Q96SB8 1091 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 TBL1YQ9BQ87 522 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 LBHD1Q9BQE6 289 aaPredicted RBP14.67□□□□□ -0.06
CDK3-201ENST00000425876 ALG13Q9NP73 1137 aaKnown RBP14.67□□□□□ -0.06
CDK3-201ENST00000425876 HAUS2Q9NVX0 235 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 COLQQ9Y215 455 aaPredicted RBP14.67□□□□□ -0.06
CDK3-201ENST00000425876 TBC1D30Q9Y2I9 924 aa14.67□□□□□ -0.06
CDK3-201ENST00000425876 CHD5Q8TDI0 1954 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 LAMA2P24043 3122 aaKnown RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 FAM47DPA6NHR8 397 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 GFRA2O00451 464 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 GREM1O60565 184 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 LPXNO60711 386 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 USP12O75317 370 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 KRT37O76014 449 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 USP1O94782 785 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 FGF19O95750 216 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 CNTFP26441 200 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 ACVRL1P37023 503 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 ETFBP38117 255 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 SERPINB9P50453 376 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 CLCN4P51793 760 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 RPS24P62847 133 aaKnown RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 CRADDP78560 199 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 SLC10A7Q0GE19 358 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 ZNF177Q13360 481 aaPredicted RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 TXNDC8Q6A555 127 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 TRMT10BQ6PF06 316 aaKnown RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 RANBP10Q6VN20 620 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 ZNF783Q6ZMS7 281 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 MARK2Q7KZI7 788 aaKnown RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 ZNF771Q7L3S4 317 aaPredicted RBP14.66□□□□□ -0.06
CDK3-201ENST00000425876 CTAGE3PQ8IX95 158 aa14.66□□□□□ -0.06
CDK3-201ENST00000425876 FAM217AQ8IXS0 508 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms