RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SCAMP3O14828 347 aaKnown RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 PRAMEF11O60813 436 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 TYRP14679 529 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 ETS1P14921 441 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 KCNA5P22460 613 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 PTPN3P26045 913 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 IVDP26440 423 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 HOXD9P28356 352 aaPredicted RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 LMAN1P49257 510 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 IRAK1P51617 712 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 CLCN6P51797 869 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 PLTPP55058 493 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 CDK16Q00536 496 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 FCHO2Q0JRZ9 810 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 RUNX3Q13761 415 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 NAA30Q147X3 362 aaPredicted RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 MORF4L2Q15014 288 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 RNF43Q68DV7 783 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 PPP1R21Q6ZMI0 780 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 HOOK3Q86VS8 718 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 CIR1Q86X95 450 aaPredicted RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 TP53INP2Q8IXH6 220 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 PPIL6Q8IXY8 311 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 CPA6Q8N4T0 437 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 TEX26Q8N6G2 289 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 HNRNPLLQ8WVV9 542 aaKnown RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 MAML1Q92585 1016 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 ART4Q93070 314 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 MYEOVQ96EZ4 313 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 HMCESQ96FZ2 354 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 IL12RB2Q99665 862 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 HINFPQ9BQA5 517 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 TRIM51Q9BSJ1 452 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 EPC1Q9H2F5 836 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 DPH5Q9H2P9 285 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 KLHL8Q9P2G9 620 aaPredicted RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 VPS28Q9UK41 221 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 FBXO10Q9UK96 956 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 AAR2Q9Y312 384 aaKnown RBP10.54□□□□□ -0.72
MDC1-205ENST00000425072 WNT6Q9Y6F9 365 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 CHD5Q8TDI0 1954 aa10.54□□□□□ -0.72
MDC1-205ENST00000425072 DOCK8Q8NF50 2099 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 A0A0D9SEW6 157 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 NEDD8-MDP1E9PL57 170 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 H3BQ06 376 aaPredicted RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 J3KR12 359 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 CBX4O00257 560 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 HOXC11O43248 304 aaPredicted RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 MBTPS2O43462 519 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ANXA9O76027 345 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 SEC31AO94979 1220 aaKnown RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ADH5P11766 374 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ACVRL1P37023 503 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 HSPA9P38646 679 aaKnown RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 NNMTP40261 264 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 MMP13P45452 471 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 RPL21P46778 160 aaKnown RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 CARSP49589 748 aaKnown RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 VPS41P49754 854 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 SGSHP51688 502 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 GDF10P55107 478 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 TNK2Q07912 1038 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ITKQ08881 620 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 NSUN2Q08J23 767 aaKnown RBP eCLIP10.53□□□□□ -0.72
MDC1-205ENST00000425072 WASHC5Q12768 1159 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 FSCBQ5H9T9 825 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 CXorf57Q6NSI4 855 aaKnown RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 VITQ6UXI7 678 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 B4GALNT4Q76KP1 1039 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ZNF567Q8N184 647 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 CCDC33Q8N5R6 958 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 OR7D4Q8NG98 312 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 CCDC110Q8TBZ0 833 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 WFIKKN2Q8TEU8 576 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 PPM1EQ8WY54 764 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 RSPRY1Q96DX4 576 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 AGAP3Q96P47 875 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 PNKPQ96T60 521 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 PHF7Q9BWX1 381 aaPredicted RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 ECT2Q9H8V3 914 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 RAB6BQ9NRW1 208 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 ABCB8Q9NUT2 735 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 PLK2Q9NYY3 685 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 DEC1Q9P2X7 70 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 UBA2Q9UBT2 640 aaPredicted RBP10.53□□□□□ -0.72
MDC1-205ENST00000425072 SEPT3Q9UH03 358 aa10.53□□□□□ -0.72
MDC1-205ENST00000425072 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.52□□□□□ -0.73
MDC1-205ENST00000425072 ANHXE9PGG2 379 aa10.52□□□□□ -0.73
MDC1-205ENST00000425072 ZBTB24O43167 697 aaPredicted RBP10.52□□□□□ -0.73
MDC1-205ENST00000425072 ATP5BP06576 529 aaKnown RBP10.52□□□□□ -0.73
MDC1-205ENST00000425072 VAV1P15498 845 aa10.52□□□□□ -0.73
MDC1-205ENST00000425072 POLR2EP19388 210 aaKnown RBP10.52□□□□□ -0.73
MDC1-205ENST00000425072 FCARP24071 287 aa10.52□□□□□ -0.73
MDC1-205ENST00000425072 MZF1P28698 734 aaPredicted RBP10.52□□□□□ -0.73
MDC1-205ENST00000425072 GDI1P31150 447 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms