RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 USP39Q53GS9 565 aaKnown RBP18.85■□□□□ 0.61
HDAC6-205ENST00000423941 INO80DQ53TQ3 878 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-205ENST00000423941 LINGO4Q6UY18 593 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 ZNF662Q6ZS27 426 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 MAP7D3Q8IWC1 876 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 RHOT1Q8IXI2 618 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 LRRC57Q8N9N7 239 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 KCTD6Q8NC69 237 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 PCDH19Q8TAB3 1148 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 TPSD1Q9BZJ3 242 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 CEP44Q9C0F1 390 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 PDFQ9HBH1 243 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 HPCAL4Q9UM19 191 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 MFHAS1Q9Y4C4 1052 aa18.85■□□□□ 0.61
HDAC6-205ENST00000423941 CEP192Q8TEP8 1941 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 MCF2LO15068 1137 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ZBTB24O43167 697 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ZNF217O75362 1048 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 RPP40O75818 363 aaKnown RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 GEMIN4P57678 1058 aaKnown RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 RPS14P62263 151 aaKnown RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ELAVL3Q14576 367 aaKnown RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 PAFAH1B3Q15102 231 aaKnown RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ANKRD20A8PQ5CZ79 823 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 KIAA1328Q86T90 577 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 TXLNBQ8N3L3 684 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ATP11CQ8NB49 1132 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 OR2A12Q8NGT7 310 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 CASKIN2Q8WXE0 1202 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 PRCCQ92733 491 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-205ENST00000423941 VOPP1Q96AW1 172 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 SIPA1Q96FS4 1042 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 GOLPH3Q9H4A6 298 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 HYOU1Q9Y4L1 999 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ACTL7AQ9Y615 435 aa18.84■□□□□ 0.61
HDAC6-205ENST00000423941 ABCA7Q8IZY2 2146 aa18.83■□□□□ 0.61
HDAC6-205ENST00000423941 FRYLO94915 3013 aa18.83■□□□□ 0.61
HDAC6-205ENST00000423941 ARHGAP42A6NI28 874 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 ALOX15BO15296 676 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 PSTPIP1O43586 416 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 BUB1O43683 1085 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 PRAMEF11O60813 436 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 PAPOLAP51003 745 aaKnown RBP18.83■□□□□ 0.6
HDAC6-205ENST00000423941 KIF5AQ12840 1032 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 BYSLQ13895 437 aaKnown RBP18.83■□□□□ 0.6
HDAC6-205ENST00000423941 KRT81Q14533 505 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 C22orf39Q6P5X5 142 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 TMCO3Q6UWJ1 677 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 Q6ZVU0 165 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 TP53INP2Q8IXH6 220 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 STK40Q8N2I9 435 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 PQLC3Q8N755 202 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 ERLEC1Q96DZ1 483 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 CELF6Q96J87 481 aaKnown RBP18.83■□□□□ 0.6
HDAC6-205ENST00000423941 RNF157Q96PX1 679 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 DDX56Q9NY93 547 aaKnown RBP18.83■□□□□ 0.6
HDAC6-205ENST00000423941 BCCIPQ9P287 314 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDAC6-205ENST00000423941 TRIM10Q9UDY6 481 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 MBD1Q9UIS9 605 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-205ENST00000423941 SCML1Q9UN30 329 aa18.83■□□□□ 0.6
HDAC6-205ENST00000423941 IGHV1OR15-9A0A0B4J2B8 117 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 GRID2IPA4D2P6 1211 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 SPOPO43791 374 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 TPMTP51580 245 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 GSE1Q14687 1217 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 ACCSLQ4AC99 568 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 ZNF776Q68DI1 518 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-205ENST00000423941 NCBP2-AS2Q69YL0 99 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 DAAM2Q86T65 1068 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 C11orf74Q86VG3 221 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 PGBD3Q8N328 593 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 RNF10Q8N5U6 811 aaKnown RBP18.82■□□□□ 0.6
HDAC6-205ENST00000423941 PCDH20Q8N6Y1 951 aaKnown RBP18.82■□□□□ 0.6
HDAC6-205ENST00000423941 FRMD1Q8N878 549 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 RLN3Q8WXF3 142 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 FAM131CQ96AQ9 280 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 CALN1Q9BXU9 219 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-205ENST00000423941 CD93Q9NPY3 652 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 KLHL11Q9NVR0 708 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 PPM1HQ9ULR3 514 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 THADAQ6YHU6 1953 aa18.82■□□□□ 0.6
HDAC6-205ENST00000423941 TNRC6BQ9UPQ9 1833 aaKnown RBP18.81■□□□□ 0.6
HDAC6-205ENST00000423941 MYO15AQ9UKN7 3530 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 C10orf142B7Z368 130 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 J3KR12 359 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 PEX11BO96011 259 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 GJC1P36383 396 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 SIM2Q14190 667 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-205ENST00000423941 IFI16Q16666 785 aaKnown RBP18.81■□□□□ 0.6
HDAC6-205ENST00000423941 PLK5Q496M5 336 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 LRRC49Q8IUZ0 686 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 KATNAL2Q8IYT4 538 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 KIAA1524Q8TCG1 905 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 WSB2Q9NYS7 404 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-205ENST00000423941 PCDHA3Q9Y5H8 950 aa18.81■□□□□ 0.6
HDAC6-205ENST00000423941 LRRD1A4D1F6 860 aa18.8■□□□□ 0.6
HDAC6-205ENST00000423941 MAFKO60675 156 aa18.8■□□□□ 0.6
HDAC6-205ENST00000423941 LMNAP02545 664 aaKnown RBP18.8■□□□□ 0.6
HDAC6-205ENST00000423941 BCKDHBP21953 392 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms