RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 VILLO15195 856 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PLRG1O43660 514 aaKnown RBP11.31□□□□□ -0.6
SSBP3-206ENST00000420121 RTN2O75298 545 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 CD160O95971 181 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 FTH1P19P0C7X4 201 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 RRM1P23921 792 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 STAT1P42224 750 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PTPN9P43378 593 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 HDAC4P56524 1084 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 ATP11AP98196 1134 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 NRG1Q02297 640 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-206ENST00000420121 CNTN1Q12860 1018 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
SSBP3-206ENST00000420121 SHBQ15464 509 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 TEAD4Q15561 434 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 ACCSLQ4AC99 568 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PIP5KL1Q5T9C9 394 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 LINGO4Q6UY18 593 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-206ENST00000420121 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 MON1BQ7L1V2 547 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PHF13Q86YI8 300 aaPredicted RBP11.31□□□□□ -0.6
SSBP3-206ENST00000420121 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 DCAF4L2Q8NA75 395 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 MSANTD4Q8NCY6 345 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 OR14C36Q8NHC7 312 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 VOPP1Q96AW1 172 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PPP1R9BQ96SB3 815 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 SYT11Q9BT88 431 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 MUC3BQ9H195 1237 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 NDFIP2Q9NV92 336 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 TMEM51Q9NW97 253 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 MSRB2Q9Y3D2 182 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PAXBP1Q9Y5B6 917 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 TRPM6Q9BX84 2022 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 PKD1L2Q7Z442 2459 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 ANKRD11Q6UB99 2663 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 A0A1B0GTQ1 180 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 FLRT2O43155 660 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 SLC7A4O43246 635 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 TEX33O43247 280 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 PCDHGA12O60330 932 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 SRGAP2O75044 1071 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 TRIM16O95361 564 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 CAPNS1P04632 268 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 OR1E1P30953 314 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 RFC1P35251 1148 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ADRA1BP35368 520 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 KRT83P78385 493 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ARF5P84085 180 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 UBXN1Q04323 297 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 TYRO3Q06418 890 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 CDO1Q16878 200 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 POM121L1PQ3SYA9 428 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ACBD5Q5T8D3 534 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 STRADAQ7RTN6 431 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 AOPEPQ8N6M6 819 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 CCDC185Q8N715 623 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 PNPLA1Q8N8W4 532 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 CHST14Q8NCH0 376 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 NEK11Q8NG66 645 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ADAMTS14Q8WXS8 1223 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ARRDC3Q96B67 414 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 C2orf49Q9BVC5 232 aaPredicted RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ZYG11BQ9C0D3 744 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 PPARGC1AQ9UBK2 798 aaKnown RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 ACTL7AQ9Y615 435 aa11.3□□□□□ -0.6
SSBP3-206ENST00000420121 TDRD6O60522 2096 aaKnown RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 DSPP15924 2871 aaKnown RBP11.3□□□□□ -0.6
SSBP3-206ENST00000420121 MBD3O95983 291 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 TPM2P07951 284 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 CD38P28907 300 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 SDC4P31431 198 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 CHRNA3P32297 505 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 CCT8P50990 548 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 GNA12Q03113 381 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 PRAMEF14Q5SWL7 426 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 C6orf118Q5T5N4 469 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 C22orf39Q6P5X5 142 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 WDR59Q6PJI9 974 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 ZNF783Q6ZMS7 281 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 DSG4Q86SJ6 1040 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 TRIM69Q86WT6 500 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 ATP11CQ8NB49 1132 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
SSBP3-206ENST00000420121 SETD7Q8WTS6 366 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms