RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 AVPR1AP37288 418 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 EFTUD2Q15029 972 aaKnown RBP eCLIP17.31■□□□□ 0.36
CALD1-204ENST00000417172 KCTD11Q693B1 232 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 PPP1R21Q6ZMI0 780 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 TPGS1Q6ZTW0 290 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 HTR3DQ70Z44 454 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 SPON2Q9BUD6 331 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 PLAC1Q9HBJ0 212 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 NT5MQ9NPB1 228 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 VPS18Q9P253 973 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 LSM7Q9UK45 103 aaKnown RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 PRRC2BQ5JSZ5 2229 aaKnown RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.36
CALD1-204ENST00000417172 RHOCP08134 193 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 SESN2P58004 480 aaPredicted RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 ZNF177Q13360 481 aaPredicted RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 IL31Q6EBC2 164 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 ITPRIPL1Q6GPH6 555 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 CEP128Q6ZU80 1094 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 RTL10Q7L3V2 364 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 FAM217AQ8IXS0 508 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 OR52K1Q8NGK4 314 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 CFAP36Q96G28 342 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 PIDD1Q9HB75 910 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 GLOD4Q9HC38 313 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 EIF2B3Q9NR50 452 aaKnown RBP17.31■□□□□ 0.36
CALD1-204ENST00000417172 DONSONQ9NYP3 566 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 BCCIPQ9P287 314 aaKnown RBP eCLIP17.31■□□□□ 0.36
CALD1-204ENST00000417172 ARHGAP26Q9UNA1 814 aa17.31■□□□□ 0.36
CALD1-204ENST00000417172 BPTFQ12830 3046 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 AP2A1O95782 977 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 LATS1O95835 1130 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 C1RP00736 705 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 MYZAPP0CAP1 466 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 EIF3BP55884 814 aaKnown RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 YBEYP58557 167 aaPredicted RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 PPARDQ03181 441 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 CCDC38Q502W7 563 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 RNF219Q5W0B1 726 aaPredicted RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 CHST9Q7L1S5 443 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 LRRC49Q8IUZ0 686 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 PGBD5Q8N414 524 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 TDRD5Q8NAT2 981 aaKnown RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 SIGLEC10Q96LC7 697 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 DDX50Q9BQ39 737 aaKnown RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 PHACTR1Q9C0D0 580 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 PDFQ9HBH1 243 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 CLEC4EQ9ULY5 219 aa17.3■□□□□ 0.36
CALD1-204ENST00000417172 NUP210Q8TEM1 1887 aaPredicted RBP17.3■□□□□ 0.36
CALD1-204ENST00000417172 FOXO6A8MYZ6 492 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MUSKO15146 869 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 LINC01565O15544 149 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 PRAMEF11O60813 436 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 NEBLO76041 1014 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MGAT1P26572 445 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MZF1P28698 734 aaPredicted RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 IL10RBQ08334 325 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 KCNC3Q14003 757 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 IHHQ14623 411 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 ANO4Q32M45 955 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 ARHGAP15Q53QZ3 475 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 C3orf62Q6ZUJ4 267 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 KDELC2Q7Z4H8 507 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 MRRFQ96E11 262 aaKnown RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 TTC25Q96NG3 672 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 TBC1D30Q9Y2I9 924 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MAD1L1Q9Y6D9 718 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 SPTBN5Q9NRC6 3674 aaKnown RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 H0Y626 953 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 CACNG3O60359 315 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 ZNF189O75820 626 aaPredicted RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 FGF19O95750 216 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 HNRNPDQ14103 355 aaKnown RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 DNAJC21Q5F1R6 531 aaKnown RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MARC1Q5VT66 337 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 LRRC8BQ6P9F7 803 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 PALM2Q8IXS6 379 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 ATP11CQ8NB49 1132 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 HJURPQ8NCD3 748 aaPredicted RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 DDI1Q8WTU0 396 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 TIFAQ96CG3 184 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MUC3BQ9H195 1237 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MAGEH1Q9H213 219 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 XAB2Q9HCS7 855 aaKnown RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 TDP1Q9NUW8 608 aa17.29■□□□□ 0.36
CALD1-204ENST00000417172 MRPS23Q9Y3D9 190 aaKnown RBP17.29■□□□□ 0.36
CALD1-204ENST00000417172 A0A087WUV0 522 aaPredicted RBP17.28■□□□□ 0.36
CALD1-204ENST00000417172 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 GOLGA8KD6RF30 607 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 RASGRF2O14827 1237 aa17.28■□□□□ 0.36
CALD1-204ENST00000417172 SNAP91O60641 907 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms