RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 MIR1-1HGQ9H1L0 117 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 NEUROG2Q9H2A3 272 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 NOL6Q9H6R4 1146 aaKnown RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 ZWILCHQ9H900 591 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 NHEJ1Q9H9Q4 299 aaPredicted RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 FBRSQ9HAH7 460 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 ANAPC7Q9UJX3 599 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 PILRBQ9UKJ0 227 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 HS3ST2Q9Y278 367 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 FCF1Q9Y324 198 aaKnown RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 SLCO1B1Q9Y6L6 691 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 MEI4A8MW99 385 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 AKR1B15C9JRZ8 316 aaPredicted RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 EEF2KO00418 725 aaKnown RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 RAMP2O60895 175 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 CD160O95971 181 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 IGLV3-19P01714 112 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 GOT1P17174 413 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 ID4P47928 161 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 MAPKAPK2P49137 400 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 ZNF75DP51815 510 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 TPI1P60174 286 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 ZBTB16Q05516 673 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 ELAVL3Q14576 367 aaKnown RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 SLC18A3Q16572 532 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 TTC31Q49AM3 519 aaPredicted RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 SPDYCQ5MJ68 293 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 DCAF12L1Q5VU92 463 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 HDDC3Q8N4P3 179 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 OR2A12Q8NGT7 310 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 OR8D1Q8WZ84 308 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 HSPH1Q92598 858 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 HMCESQ96FZ2 354 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 CELF6Q96J87 481 aaKnown RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 OMDQ99983 421 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 ACE2Q9BYF1 805 aaPredicted RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 BTBD1Q9H0C5 482 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 CTTNBP2NLQ9P2B4 639 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 EIF2B4Q9UI10 523 aaKnown RBP13.43□□□□□ -0.26
SSB-203ENST00000413002 NCKAP1Q9Y2A7 1128 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 LAMA1P25391 3075 aa13.43□□□□□ -0.26
SSB-203ENST00000413002 LNP1A1A4G5 178 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 METTL12A8MUP2 240 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 RASA4BC9J798 803 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 KHNYNO15037 678 aaKnown RBP13.42□□□□□ -0.26
SSB-203ENST00000413002 MCF2LO15068 1137 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 RASA4O43374 803 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
SSB-203ENST00000413002 FSBPO95073 299 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 SEMA4FO95754 770 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 CTSLP07711 333 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 GJC1P36383 396 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 SERPINH1P50454 418 aaKnown RBP13.42□□□□□ -0.26
SSB-203ENST00000413002 AIF1P55008 147 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 RETSATQ6NUM9 610 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 C22orf39Q6P5X5 142 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
SSB-203ENST00000413002 DPY19L3Q6ZPD9 716 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 TC2NQ8N9U0 490 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 OR6K2Q8NGY2 324 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 PIP4K2CQ8TBX8 421 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 ZNF564Q8TBZ8 553 aaPredicted RBP13.42□□□□□ -0.26
SSB-203ENST00000413002 GRIN3AQ8TCU5 1115 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 CCDC42Q96M95 316 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 MAGEH1Q9H213 219 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 CDV3Q9UKY7 258 aaKnown RBP13.42□□□□□ -0.26
SSB-203ENST00000413002 MFHAS1Q9Y4C4 1052 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 NUMA1Q14980 2115 aa13.42□□□□□ -0.26
SSB-203ENST00000413002 SSU72P8A0A1W2PR75 194 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 DCDC2BA2VCK2 349 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 TMEM110-MUSTN1A8MSY1 372 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 PRR5-ARHGAP8B1AHC4 643 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 DAPK3O43293 454 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 BUB1O43683 1085 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 H2AFZP0C0S5 128 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 RARAP10276 462 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 C7P10643 843 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 C5AR1P21730 350 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 GKP32189 559 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 CHRNA3P32297 505 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 DRD3P35462 400 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 MAPK8P45983 427 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
SSB-203ENST00000413002 ARHGAP8P85298 464 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 PIGHQ14442 188 aaPredicted RBP13.41□□□□□ -0.26
SSB-203ENST00000413002 WDR45BQ5MNZ6 344 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 NCEH1Q6PIU2 408 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 RFX8Q6ZV50 586 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 H2AFVQ71UI9 128 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 CNGA4Q8IV77 575 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 TP53INP2Q8IXH6 220 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 ZCCHC9Q8N567 271 aaKnown RBP13.41□□□□□ -0.26
SSB-203ENST00000413002 CADM4Q8NFZ8 388 aa13.41□□□□□ -0.26
SSB-203ENST00000413002 OR2I1PQ8NGU4 316 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms