RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 DGLUCYQ7Z3D6 616 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 AADATQ8N5Z0 425 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 FNIP1Q8TF40 1166 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 DNASE2BQ8WZ79 361 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 ARHGEF2Q92974 986 aaKnown RBP19.27■□□□□ 0.68
TRIM56-202ENST00000412507 PEBP4Q96S96 227 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 THAP2Q9H0W7 228 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 MIR1-1HGQ9H1L0 117 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 NEUROG2Q9H2A3 272 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 EIF2B4Q9UI10 523 aaKnown RBP19.27■□□□□ 0.68
TRIM56-202ENST00000412507 SLC6A14Q9UN76 642 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 AP4E1Q9UPM8 1137 aa19.27■□□□□ 0.68
TRIM56-202ENST00000412507 TRPM6Q9BX84 2022 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 SERPINF2P08697 491 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 ENGP17813 658 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 C5AR1P21730 350 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 HNRNPH3P31942 346 aaKnown RBP19.26■□□□□ 0.67
TRIM56-202ENST00000412507 EIF4A3P38919 411 aaKnown RBP19.26■□□□□ 0.67
TRIM56-202ENST00000412507 METAP1P53582 386 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 ARF5P84085 180 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 TRIM14Q14142 442 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 CCDC122Q5T0U0 273 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 RETSATQ6NUM9 610 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 ALKBH5Q6P6C2 394 aaKnown RBP19.26■□□□□ 0.67
TRIM56-202ENST00000412507 RABEPKQ7Z6M1 372 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 HDDC3Q8N4P3 179 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 SNX19Q92543 992 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 EPAS1Q99814 870 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 ACE2Q9BYF1 805 aaPredicted RBP19.26■□□□□ 0.67
TRIM56-202ENST00000412507 PCED1AQ9H1Q7 454 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 CAPN10Q9HC96 672 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 SUSD2Q9UGT4 822 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 SARDHQ9UL12 918 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 ACTL7AQ9Y615 435 aa19.26■□□□□ 0.67
TRIM56-202ENST00000412507 FAM47DPA6NHR8 397 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 C4orf47A7E2U8 309 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 PLK4O00444 970 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 CDX4O14627 284 aaPredicted RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 MCF2LO15068 1137 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 ALOX15BO15296 676 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 RAMP2O60895 175 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 GNSP15586 552 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 MIPP30301 263 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 DRD3P35462 400 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 ETFBP38117 255 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 SERPINH1P50454 418 aaKnown RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 CLCN6P51797 869 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 GALCP54803 685 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 POLD3Q15054 466 aaPredicted RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 CA9Q16790 459 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 ERMARDQ5T6L9 678 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 DAB2IPQ5VWQ8 1189 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 C22orf39Q6P5X5 142 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 DSG4Q86SJ6 1040 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 ZCCHC9Q8N567 271 aaKnown RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 RTL3Q8N8U3 475 aaKnown RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 OR8K1Q8NGG5 319 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 PIP4K2CQ8TBX8 421 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 DNAJC7Q99615 494 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 SNRNP25Q9BV90 132 aaKnown RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 MAGEH1Q9H213 219 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 TNKS2Q9H2K2 1166 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 DHX35Q9H5Z1 703 aaKnown RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 TMEM9BQ9NQ34 198 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 FZD4Q9ULV1 537 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.25■□□□□ 0.67
TRIM56-202ENST00000412507 PCNX2A6NKB5 2137 aa19.25■□□□□ 0.67
TRIM56-202ENST00000412507 LRCH4O75427 683 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 FSBPO95073 299 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 CD160O95971 181 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 CTSLP07711 333 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 GOT1P17174 413 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 MAPK8P45983 427 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 TPI1P60174 286 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 GFPT1Q06210 699 aaPredicted RBP19.24■□□□□ 0.67
TRIM56-202ENST00000412507 SLC20A2Q08357 652 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 POM121L1PQ3SYA9 428 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.24■□□□□ 0.67
TRIM56-202ENST00000412507 CHST14Q8NCH0 376 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 OR2A12Q8NGT7 310 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 BIRC7Q96CA5 298 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 ARHGEF26Q96DR7 871 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 CCDC114Q96M63 670 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 KCTD15Q96SI1 283 aaPredicted RBP19.24■□□□□ 0.67
TRIM56-202ENST00000412507 NUP85Q9BW27 656 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 NOL6Q9H6R4 1146 aaKnown RBP19.24■□□□□ 0.67
TRIM56-202ENST00000412507 CATSPERBQ9H7T0 1116 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 PPM1HQ9ULR3 514 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 NENFQ9UMX5 172 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 FCF1Q9Y324 198 aaKnown RBP19.24■□□□□ 0.67
TRIM56-202ENST00000412507 FARP1Q9Y4F1 1045 aaPredicted RBP19.24■□□□□ 0.67
TRIM56-202ENST00000412507 SLCO1B1Q9Y6L6 691 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 CABIN1Q9Y6J0 2220 aa19.24■□□□□ 0.67
TRIM56-202ENST00000412507 A0A1B0GTW7 788 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 WASH4PA8MWX3 477 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 C1QTNF3-AMACRE9PGA6 284 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 EEF2KO00418 725 aaKnown RBP19.23■□□□□ 0.67
TRIM56-202ENST00000412507 PRPSAP2O60256 369 aa19.23■□□□□ 0.67
TRIM56-202ENST00000412507 ZNF821O75541 412 aaPredicted RBP19.23■□□□□ 0.67
TRIM56-202ENST00000412507 TPM1P09493 284 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms